Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AL118556.2-201ENST00000614375 824 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AL162574.1-201ENST00000615702 950 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AL122023.1-201ENST00000622847 530 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AC021106.3-201ENST00000623925 531 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AP003499.2-201ENST00000624100 483 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AC092159.4-201ENST00000624944 550 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 MRRFP1-201ENST00000435941 1675 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 CASC19-246ENST00000641625 1606 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AC144833.1-201ENST00000567953 4089 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AL138820.1-201ENST00000617901 5305 ntBASIC4.82□□□□□ -1.64
ANKRD55Q3KP44 AL031595.2-201ENST00000624215 19071 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 RNU6-670P-201ENST00000364312 104 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL139805.1-201ENST00000407837 289 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 RNA5SP156-201ENST00000410250 110 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 RNU6-564P-201ENST00000410983 104 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 RPS7P8-201ENST00000418311 581 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 OR6K4P-201ENST00000423179 955 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 OR10T1P-201ENST00000424327 947 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC099782.1-201ENST00000425889 474 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL136231.1-201ENST00000429407 730 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC093716.1-201ENST00000435923 377 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL359265.1-201ENST00000440296 795 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 NDUFA5P8-201ENST00000449019 346 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC037198.2-201ENST00000478845 733 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC083795.1-201ENST00000491760 320 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC092349.1-201ENST00000504903 310 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 NPIPB14P-203ENST00000532298 987 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 TXNP4-201ENST00000575018 310 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 HMGB1P51-201ENST00000605166 638 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 BX322635.1-201ENST00000605804 496 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC021766.1-201ENST00000624404 741 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 MT-RNR2-201ENST00000387347 1559 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 AC005005.4-201ENST00000623789 16698 ntBASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ANKRD55Q3KP44 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.8□□□□□ -1.64
ANKRD55Q3KP44 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.8□□□□□ -1.64
ANKRD55Q3KP44 AC083843.2-201ENST00000568248 6253 ntBASIC4.8□□□□□ -1.64
ANKRD55Q3KP44 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.8□□□□□ -1.64
ANKRD55Q3KP44 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms