Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC239868.2-201ENST00000564237 4527 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 AL449283.1-201ENST00000602631 3403 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.98□□□□□ -1.61
H3F3AP84243 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 TMSB4XP4-201ENST00000323496 618 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.98□□□□□ -1.61
H3F3AP84243 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 AL391422.1-201ENST00000402155 436 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 DPPA2P2-201ENST00000418220 897 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.98□□□□□ -1.61
H3F3AP84243 FMO7P-201ENST00000436045 768 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.98□□□□□ -1.61
H3F3AP84243 VDAC2P4-201ENST00000452925 711 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 AZGP1P2-201ENST00000454506 345 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 RN7SL72P-201ENST00000460697 269 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.98□□□□□ -1.61
H3F3AP84243 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.98□□□□□ -1.61
H3F3AP84243 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.98□□□□□ -1.61
H3F3AP84243 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.98□□□□□ -1.61
H3F3AP84243 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 MRPS21P7-201ENST00000566937 238 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 AC026124.2-201ENST00000621847 656 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 AC138965.3-201ENST00000623875 498 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 MT-RNR2-201ENST00000387347 1559 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.98□□□□□ -1.61
H3F3AP84243 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
H3F3AP84243 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
H3F3AP84243 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.97□□□□□ -1.61
H3F3AP84243 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 AC018809.2-201ENST00000602436 3823 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
H3F3AP84243 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 RN7SKP6-201ENST00000364795 319 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
H3F3AP84243 SNORA17A-201ENST00000391185 133 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 RN7SKP286-201ENST00000410894 299 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 OR6E1P-201ENST00000414424 923 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 OR6D1P-201ENST00000436165 939 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC073909.1-201ENST00000447112 999 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 RN7SL188P-201ENST00000469842 285 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.97□□□□□ -1.61
H3F3AP84243 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 MORF4L2P1-201ENST00000503761 858 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 GOLGA5P1-201ENST00000507317 980 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC109481.1-201ENST00000509173 282 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 UGT2A3P7-201ENST00000510485 734 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 NPM1P21-201ENST00000513394 762 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC112191.2-201ENST00000522428 333 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.97□□□□□ -1.61
H3F3AP84243 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.97□□□□□ -1.61
H3F3AP84243 OR8Q1P-201ENST00000526467 655 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 OR5AM1P-201ENST00000532136 1032 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 OR4A43P-201ENST00000532938 908 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
H3F3AP84243 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 RBM22P12-201ENST00000567098 1255 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC020978.7-201ENST00000575953 1187 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC027216.1-201ENST00000577726 685 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 MIR1273E-201ENST00000581165 102 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.97□□□□□ -1.61
H3F3AP84243 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 AC009237.13-201ENST00000603193 276 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 FO393422.1-201ENST00000603908 708 ntBASIC4.97□□□□□ -1.61
H3F3AP84243 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.97□□□□□ -1.61
H3F3AP84243 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 961.8 ms