Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC004890.3-201ENST00000605566 1095 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC073137.1-201ENST00000605636 634 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AL645933.2-201ENST00000606743 1207 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AL359091.2-201ENST00000609303 556 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 FAM27E2-201ENST00000619668 403 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CX3CL1P78423 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 TCP1P3-201ENST00000414406 1498 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 SPATA2P1-201ENST00000431223 2055 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC016583.1-201ENST00000624221 2431 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CX3CL1P78423 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-1320P-201ENST00000390838 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-1269P-201ENST00000391139 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 MIR1275-201ENST00000408770 80 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AL590806.1-201ENST00000415818 853 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 MTCO2P1-201ENST00000424648 477 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 HSFY7P-201ENST00000432672 318 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL512661.1-201ENST00000434586 1253 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL731534.1-201ENST00000434711 269 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC023141.3-201ENST00000436698 278 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 HSFY8P-201ENST00000437934 318 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL353662.1-201ENST00000439099 327 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 RNFT1P2-201ENST00000443064 757 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 TRIM60P16-201ENST00000444048 694 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 HSFY5P-201ENST00000453726 309 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC118758.1-202ENST00000454719 225 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-599P-201ENST00000459383 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-1193P-201ENST00000459461 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC124945.1-201ENST00000485133 188 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC083795.1-201ENST00000491760 320 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 CCDC11P1-201ENST00000503137 1162 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC122718.2-201ENST00000505325 591 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 OR7E99P-201ENST00000505750 922 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC109635.6-201ENST00000525487 1113 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 MTND5P21-201ENST00000531961 522 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 UBTFL9-201ENST00000534504 1148 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC027216.1-201ENST00000577726 685 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.81□□□□□ -1.64
CX3CL1P78423 MIR132-201ENST00000591554 101 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CL1P78423 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC124916.2-201ENST00000604416 224 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AC096861.1-201ENST00000616652 240 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-368P-201ENST00000620928 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 MIR6806-201ENST00000622141 64 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 RNU6-538P-201ENST00000622329 107 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL359742.1-201ENST00000622497 540 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 AL683826.1-201ENST00000624104 627 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 HSPD1P9-201ENST00000420325 1636 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CX3CL1P78423 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 AL359715.3-201ENST00000569267 2123 ntBASIC4.81□□□□□ -1.64
CX3CL1P78423 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms