Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.3□□□□□ -1.4
NEK3P51956 AC090888.3-201ENST00000558917 509 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 SS18L2P2-201ENST00000583960 235 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 AP001437.1-201ENST00000608783 456 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 AC008759.3-201ENST00000613300 508 ntBASIC6.3□□□□□ -1.4
NEK3P51956 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.3□□□□□ -1.4
NEK3P51956 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NEK3P51956 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEK3P51956 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NEK3P51956 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NEK3P51956 MIR433-201ENST00000384837 93 ntBASIC6.29□□□□□ -1.4
NEK3P51956 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.29□□□□□ -1.4
NEK3P51956 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.29□□□□□ -1.4
NEK3P51956 PNKDP1-201ENST00000435914 430 ntBASIC6.29□□□□□ -1.4
NEK3P51956 OR3D1P-201ENST00000438288 955 ntBASIC6.29□□□□□ -1.4
NEK3P51956 RPL34P26-201ENST00000445636 354 ntBASIC6.29□□□□□ -1.4
NEK3P51956 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.29□□□□□ -1.4
NEK3P51956 HMGB1P26-201ENST00000452520 628 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AL133244.1-201ENST00000456007 258 ntBASIC6.29□□□□□ -1.4
NEK3P51956 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.29□□□□□ -1.4
NEK3P51956 snoU13.29-201ENST00000459370 104 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC008379.1-201ENST00000463655 464 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC096741.1-201ENST00000472250 846 ntBASIC6.29□□□□□ -1.4
NEK3P51956 OR7E99P-201ENST00000505750 922 ntBASIC6.29□□□□□ -1.4
NEK3P51956 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 IMPA1P1-201ENST00000510718 842 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 HIGD1AP18-201ENST00000520730 278 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC013701.1-201ENST00000522657 465 ntBASIC6.29□□□□□ -1.4
NEK3P51956 NPM1P35-201ENST00000533043 868 ntBASIC6.29□□□□□ -1.4
NEK3P51956 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NEK3P51956 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.29□□□□□ -1.4
NEK3P51956 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.29□□□□□ -1.4
NEK3P51956 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.29□□□□□ -1.4
NEK3P51956 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 AL109741.3-201ENST00000561748 592 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC007346.1-201ENST00000569208 867 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.29□□□□□ -1.4
NEK3P51956 AC027229.1-201ENST00000583887 253 ntBASIC6.29□□□□□ -1.4
NEK3P51956 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 DYNLL1P1-201ENST00000595442 269 ntBASIC6.29□□□□□ -1.4
NEK3P51956 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 AC092681.3-201ENST00000609463 678 ntBASIC6.29□□□□□ -1.4
NEK3P51956 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.29□□□□□ -1.4
NEK3P51956 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.29□□□□□ -1.4
NEK3P51956 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 AC003992.1-201ENST00000635364 557 ntBASIC6.29□□□□□ -1.4
NEK3P51956 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.29□□□□□ -1.4
NEK3P51956 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEK3P51956 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 AL133243.2-201ENST00000610331 1621 ntBASIC6.28□□□□□ -1.4
NEK3P51956 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 CCNT2P1-201ENST00000423082 1315 ntBASIC6.28□□□□□ -1.4
NEK3P51956 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NEK3P51956 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 COX6B1P3-201ENST00000312310 260 ntBASIC6.28□□□□□ -1.4
NEK3P51956 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NEK3P51956 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 MIR1282-201ENST00000408865 101 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms