Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
NEDD4P46934 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEDD4P46934 RNA5SP339-201ENST00000390987 122 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 DBIP1-201ENST00000401435 260 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 PPIAP9-201ENST00000403866 498 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 RN7SKP229-201ENST00000410465 302 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AL390774.1-201ENST00000411924 246 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.42□□□□□ -1.38
NEDD4P46934 NPM1P4-201ENST00000414095 812 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 CYCSP6-201ENST00000434498 302 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 NDUFB4P8-201ENST00000435351 367 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 RPSAP41-201ENST00000439695 860 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 AL133445.1-201ENST00000467051 452 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.42□□□□□ -1.38
NEDD4P46934 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 AC126177.5-201ENST00000549599 178 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.42□□□□□ -1.38
NEDD4P46934 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 MIR3176-201ENST00000582210 90 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.42□□□□□ -1.38
NEDD4P46934 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.42□□□□□ -1.38
NEDD4P46934 AL355480.1-201ENST00000629041 99 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AC073869.8-201ENST00000641806 335 ntBASIC6.42□□□□□ -1.38
NEDD4P46934 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.42□□□□□ -1.38
NEDD4P46934 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD4P46934 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
NEDD4P46934 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NEDD4P46934 AC003973.3-201ENST00000624863 2822 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NEDD4P46934 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NEDD4P46934 AP000432.2-201ENST00000624164 2048 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.41□□□□□ -1.38
NEDD4P46934 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEDD4P46934 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
NEDD4P46934 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 RPS27AP6-201ENST00000427962 448 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 AC023271.1-201ENST00000445936 1090 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 GLUD1P3-202ENST00000508551 200 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NEDD4P46934 AC097486.1-201ENST00000515331 210 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.41□□□□□ -1.38
NEDD4P46934 OR4A43P-201ENST00000532938 908 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.41□□□□□ -1.38
NEDD4P46934 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD4P46934 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD4P46934 FKBP1AP1-201ENST00000594588 318 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 AL139124.1-201ENST00000609123 421 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 AP000864.1-201ENST00000609424 650 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 AC010632.3-201ENST00000611377 369 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 AC109309.2-201ENST00000612597 332 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 AC109583.2-201ENST00000617367 129 ntBASIC6.41□□□□□ -1.38
NEDD4P46934 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEDD4P46934 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEDD4P46934 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD4P46934 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEDD4P46934 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NEDD4P46934 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD4P46934 AP000641.1-201ENST00000531988 1639 ntBASIC6.4□□□□□ -1.38
NEDD4P46934 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.4□□□□□ -1.38
NEDD4P46934 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NEDD4P46934 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NEDD4P46934 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD4P46934 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD4P46934 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.4□□□□□ -1.38
NEDD4P46934 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 RNA5SP183-201ENST00000362452 119 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 U3.2-201ENST00000362981 210 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 MIR323B-201ENST00000385269 82 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 AC009804.1-201ENST00000400949 179 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.4□□□□□ -1.39
NEDD4P46934 MRPS21P3-201ENST00000436696 262 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 AL451063.1-201ENST00000450164 1133 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 AL672138.1-201ENST00000450604 1015 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 RPL7P45-201ENST00000455851 743 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 PPP1R11P1-201ENST00000486095 376 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms