Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
BRCC3P46736 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.9□□□□□ -1.47
BRCC3P46736 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
BRCC3P46736 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCC3P46736 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCC3P46736 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
BRCC3P46736 AL121886.1-201ENST00000358609 435 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 SPTLC1P2-201ENST00000407089 121 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 RN7SKP279-201ENST00000411383 298 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.89□□□□□ -1.47
BRCC3P46736 CNOT7P2-201ENST00000441051 832 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.89□□□□□ -1.47
BRCC3P46736 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 AC005532.2-201ENST00000467154 373 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 RPL7P39-201ENST00000481157 744 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AC006499.3-201ENST00000506077 748 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 OR5M14P-201ENST00000506803 618 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 CDC42P3-201ENST00000518493 633 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.89□□□□□ -1.47
BRCC3P46736 AC004825.1-201ENST00000555068 586 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 NPM1P42-201ENST00000560329 862 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 MIR4443-201ENST00000585052 53 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.89□□□□□ -1.47
BRCC3P46736 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AC211433.2-201ENST00000608433 387 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 AP001153.1-201ENST00000641024 338 ntBASIC5.89□□□□□ -1.47
BRCC3P46736 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
BRCC3P46736 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCC3P46736 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
BRCC3P46736 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
BRCC3P46736 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
BRCC3P46736 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
BRCC3P46736 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
BRCC3P46736 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCC3P46736 RNU1-19P-201ENST00000363306 165 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 MIR105-2-201ENST00000385083 81 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AL133388.1-201ENST00000404509 287 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 RNU4-34P-201ENST00000410431 124 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 RNF10P1-201ENST00000418589 369 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 SLC35E1P1-201ENST00000419313 864 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 AC021876.1-201ENST00000425959 359 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AL139148.1-201ENST00000427122 680 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 BX679664.2-201ENST00000439282 283 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AC245047.2-201ENST00000441060 530 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 AURKAPS1-201ENST00000451805 1212 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 RN7SL172P-201ENST00000460535 303 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCC3P46736 AC004815.1-201ENST00000484185 331 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AC072052.1-201ENST00000496556 306 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCC3P46736 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCC3P46736 AL049779.2-201ENST00000553847 315 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 AC106730.2-201ENST00000566641 540 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
BRCC3P46736 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCC3P46736 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BRCC3P46736 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCC3P46736 AC099654.3-201ENST00000447087 1546 ntBASIC5.88□□□□□ -1.47
BRCC3P46736 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
BRCC3P46736 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
BRCC3P46736 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.87□□□□□ -1.47
BRCC3P46736 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BRCC3P46736 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BRCC3P46736 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRCC3P46736 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCC3P46736 U3.2-201ENST00000362981 210 ntBASIC5.87□□□□□ -1.47
BRCC3P46736 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms