Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC096996.1-201ENST00000563813 325 ntBASIC5.22□□□□□ -1.57
RFC3P40938 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.22□□□□□ -1.57
RFC3P40938 AC007066.2-202ENST00000566531 914 ntBASIC5.22□□□□□ -1.57
RFC3P40938 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.22□□□□□ -1.57
RFC3P40938 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.22□□□□□ -1.57
RFC3P40938 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.22□□□□□ -1.57
RFC3P40938 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFC3P40938 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 AC138907.8-201ENST00000623981 2256 ntBASIC5.22□□□□□ -1.57
RFC3P40938 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RFC3P40938 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RFC3P40938 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RFC3P40938 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 SNORA11B-201ENST00000408175 129 ntBASIC5.21□□□□□ -1.58
RFC3P40938 RN7SKP278-201ENST00000410504 342 ntBASIC5.21□□□□□ -1.58
RFC3P40938 RPS6P23-201ENST00000413224 722 ntBASIC5.21□□□□□ -1.58
RFC3P40938 BMS1P17-202ENST00000416720 316 ntBASIC5.21□□□□□ -1.58
RFC3P40938 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 AC019205.1-201ENST00000421830 730 ntBASIC5.21□□□□□ -1.58
RFC3P40938 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 BX510359.3-201ENST00000422168 306 ntBASIC5.21□□□□□ -1.58
RFC3P40938 RPS27AP6-201ENST00000427962 448 ntBASIC5.21□□□□□ -1.58
RFC3P40938 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.21□□□□□ -1.58
RFC3P40938 AP000547.1-201ENST00000454360 617 ntBASIC5.21□□□□□ -1.58
RFC3P40938 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.21□□□□□ -1.58
RFC3P40938 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 RN7SL184P-201ENST00000488308 297 ntBASIC5.21□□□□□ -1.58
RFC3P40938 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.21□□□□□ -1.58
RFC3P40938 AC090022.1-201ENST00000546569 311 ntBASIC5.21□□□□□ -1.58
RFC3P40938 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 AC007346.2-201ENST00000564816 892 ntBASIC5.21□□□□□ -1.58
RFC3P40938 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 MIR1273E-201ENST00000581165 102 ntBASIC5.21□□□□□ -1.58
RFC3P40938 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC3P40938 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 CU639417.4-201ENST00000623928 207 ntBASIC5.21□□□□□ -1.58
RFC3P40938 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RFC3P40938 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC3P40938 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RFC3P40938 AC003985.2-201ENST00000562268 1669 ntBASIC5.21□□□□□ -1.58
RFC3P40938 AC026523.2-201ENST00000625039 7739 ntBASIC5.21□□□□□ -1.58
RFC3P40938 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.2□□□□□ -1.58
RFC3P40938 Z83820.1-201ENST00000456978 1499 ntBASIC5.2□□□□□ -1.58
RFC3P40938 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.2□□□□□ -1.58
RFC3P40938 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.2□□□□□ -1.58
RFC3P40938 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFC3P40938 RNA5SP132-201ENST00000364725 118 ntBASIC5.2□□□□□ -1.58
RFC3P40938 RN7SKP124-201ENST00000364730 341 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.2□□□□□ -1.58
RFC3P40938 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFC3P40938 RPL35AP24-201ENST00000413846 330 ntBASIC5.2□□□□□ -1.58
RFC3P40938 NIFKP3-201ENST00000417799 865 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.2□□□□□ -1.58
RFC3P40938 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.2□□□□□ -1.58
RFC3P40938 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.2□□□□□ -1.58
RFC3P40938 AC087672.1-201ENST00000479876 766 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AC006539.1-201ENST00000481419 501 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AL035690.1-201ENST00000490892 383 ntBASIC5.2□□□□□ -1.58
RFC3P40938 DUTP1-201ENST00000493631 470 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.2□□□□□ -1.58
RFC3P40938 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.2□□□□□ -1.58
RFC3P40938 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.2□□□□□ -1.58
RFC3P40938 RBM22P12-201ENST00000567098 1255 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AC027216.1-201ENST00000577726 685 ntBASIC5.2□□□□□ -1.58
RFC3P40938 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.2□□□□□ -1.58
RFC3P40938 AC063977.5-201ENST00000601044 974 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
RFC3P40938 AL035661.1-201ENST00000620459 1144 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AC069234.4-201ENST00000621276 412 ntBASIC5.2□□□□□ -1.58
RFC3P40938 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.2□□□□□ -1.58
RFC3P40938 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RFC3P40938 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 ICE2P1-201ENST00000512800 1849 ntBASIC5.2□□□□□ -1.58
RFC3P40938 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC3P40938 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms