Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC018809.2-201ENST00000602436 3823 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 RN7SKP6-201ENST00000364795 319 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 RNU4-2-201ENST00000365668 141 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGCLP35914 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 OR6E1P-201ENST00000414424 923 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 TNPO1P1-201ENST00000423641 1138 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 OR6D1P-201ENST00000436165 939 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCLP35914 AP000281.1-201ENST00000444036 316 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC073909.1-201ENST00000447112 999 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 YWHAEP1-201ENST00000453697 763 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 RPL7P51-201ENST00000490532 749 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 RN7SL284P-201ENST00000498823 275 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCLP35914 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 MIR1273E-201ENST00000581165 102 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCLP35914 AC060766.1-201ENST00000590824 627 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGCLP35914 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCLP35914 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 AC012616.1-201ENST00000600294 197 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCLP35914 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGCLP35914 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCLP35914 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 KARSP1-201ENST00000451871 1752 ntBASIC5.55□□□□□ -1.52
HMGCLP35914 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 BCORP1-203ENST00000513194 5093 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 AC104964.3-201ENST00000606115 2860 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCLP35914 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCLP35914 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 AL391422.1-201ENST00000402155 436 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 RPL7P56-201ENST00000429441 717 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 AL389925.1-201ENST00000432257 728 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCLP35914 IGBP1P3-201ENST00000447449 1000 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCLP35914 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMGCLP35914 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCLP35914 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCLP35914 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC027026.1-201ENST00000532323 742 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 AC022404.1-201ENST00000555320 273 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
HMGCLP35914 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 AL691477.1-201ENST00000624398 162 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGCLP35914 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 AC144833.1-201ENST00000567953 4089 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGCLP35914 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCLP35914 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HMGCLP35914 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
HMGCLP35914 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGCLP35914 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMGCLP35914 AC006206.1-201ENST00000544842 3387 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 ADAM24P-201ENST00000398655 2101 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms