Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC007938.2-201ENST00000604666 2634 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.4□□□□□ -1.54
PTPN6P29350 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PTPN6P29350 RNA5SP500-201ENST00000364486 119 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN6P29350 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC005042.1-201ENST00000393397 800 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AL357752.1-201ENST00000412817 349 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 VN1R31P-201ENST00000417498 730 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 RPS3P2-201ENST00000421346 701 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AL035660.1-201ENST00000422041 222 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN6P29350 UBE2V2P1-201ENST00000434717 398 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PTPN6P29350 MTND4LP12-201ENST00000448237 295 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC108751.3-201ENST00000461814 1020 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 AP000648.1-201ENST00000529682 397 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC006530.1-201ENST00000555980 571 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN6P29350 AL356801.1-201ENST00000559320 294 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN6P29350 AC092121.1-201ENST00000569452 202 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AP001542.1-201ENST00000591314 200 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC009237.13-201ENST00000603193 276 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AL031601.1-201ENST00000605702 394 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 AL158062.1-201ENST00000619632 745 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PTPN6P29350 AC022919.1-201ENST00000624979 626 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.4□□□□□ -1.54
PTPN6P29350 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.4□□□□□ -1.54
PTPN6P29350 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.4□□□□□ -1.55
PTPN6P29350 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.4□□□□□ -1.55
PTPN6P29350 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.4□□□□□ -1.55
PTPN6P29350 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PTPN6P29350 AL031595.2-201ENST00000624215 19071 ntBASIC5.4□□□□□ -1.55
PTPN6P29350 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PTPN6P29350 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.4□□□□□ -1.55
PTPN6P29350 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.4□□□□□ -1.55
PTPN6P29350 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PTPN6P29350 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN6P29350 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.4□□□□□ -1.55
PTPN6P29350 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.39□□□□□ -1.55
PTPN6P29350 THAP12P8-201ENST00000447914 2115 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN6P29350 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.39□□□□□ -1.55
PTPN6P29350 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTPN6P29350 U3.23-201ENST00000391132 200 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 SEPT7P8-201ENST00000413308 775 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN6P29350 RPL12P43-201ENST00000420608 499 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC106901.1-201ENST00000425086 698 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.39□□□□□ -1.55
PTPN6P29350 BX323845.3-201ENST00000428215 527 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 RPS29P14-201ENST00000431518 171 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC011476.1-201ENST00000466725 307 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC099521.1-201ENST00000482557 334 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC073610.1-201ENST00000489971 396 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 RPSAP51-201ENST00000497462 645 ntBASIC5.39□□□□□ -1.55
PTPN6P29350 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms