Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.47□□□□□ -1.69
CCL3L1P16619 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 MIR133B-201ENST00000362210 119 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 RNA5SP453-201ENST00000362503 119 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AL133388.1-201ENST00000404509 287 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 RN7SKP59-201ENST00000410520 314 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 RN7SKP206-201ENST00000410823 293 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 SRSF1P1-201ENST00000424058 520 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AL121776.1-201ENST00000429337 372 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 CYCSP6-201ENST00000434498 302 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC007386.1-201ENST00000455212 582 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AC092754.1-201ENST00000472975 479 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 EIF1P7-201ENST00000487533 337 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AC091912.1-201ENST00000511351 248 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AP004607.2-201ENST00000533949 322 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.47□□□□□ -1.69
CCL3L1P16619 OR11H3P-201ENST00000554547 982 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC009962.1-201ENST00000567327 3813 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 RBM22P1-201ENST00000578589 1214 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.47□□□□□ -1.69
CCL3L1P16619 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.47□□□□□ -1.69
CCL3L1P16619 MIR6729-201ENST00000618194 65 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 AC135068.5-201ENST00000624197 983 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 AL355834.1-201ENST00000556602 3965 ntBASIC4.47□□□□□ -1.69
CCL3L1P16619 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CCL3L1P16619 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCL3L1P16619 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCL3L1P16619 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.46□□□□□ -1.69
CCL3L1P16619 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCL3L1P16619 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCL3L1P16619 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCL3L1P16619 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCL3L1P16619 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.46□□□□□ -1.69
CCL3L1P16619 AL022322.2-201ENST00000624072 20397 ntBASIC4.46□□□□□ -1.69
CCL3L1P16619 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 RN7SKP145-201ENST00000363291 303 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 RNA5SP132-201ENST00000364725 118 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 RN7SKP269-201ENST00000365545 319 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 OR3A2-201ENST00000408891 1076 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 PRUNEP1-201ENST00000425846 705 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.46□□□□□ -1.7
CCL3L1P16619 MTND2P40-201ENST00000436718 841 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 CYCSP12-201ENST00000437729 300 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AL672138.1-201ENST00000450604 1015 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.46□□□□□ -1.7
CCL3L1P16619 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 EIF3LP3-201ENST00000495197 822 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.46□□□□□ -1.7
CCL3L1P16619 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 RPL7L1P4-201ENST00000513004 707 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 BLZF2P-201ENST00000553776 1130 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
CCL3L1P16619 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC233699.1-201ENST00000569955 1168 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.46□□□□□ -1.7
CCL3L1P16619 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 MIR6862-1-201ENST00000613016 70 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms