Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RN7SL447P-201ENST00000494711 245 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 RPS17P5-201ENST00000498293 408 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXC4P09017 AC024558.1-201ENST00000505008 528 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AC008638.1-201ENST00000506035 866 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC4P09017 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC4P09017 GAPDHP62-201ENST00000515313 990 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 RNA5SP34-201ENST00000516887 130 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 RN7SKP99-201ENST00000517028 307 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXC4P09017 AC027026.1-201ENST00000532323 742 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 AL049779.2-201ENST00000553847 315 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXC4P09017 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC4P09017 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC4P09017 OR7E18P-201ENST00000592589 702 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 AL162456.1-201ENST00000634535 2006 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 MIR133A2-201ENST00000347538 102 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 RNA5SP335-201ENST00000363817 110 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 MIR1178-201ENST00000408396 91 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AL390774.1-201ENST00000411924 246 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 PRUNEP1-201ENST00000425846 705 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AC092651.1-201ENST00000426110 312 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 RPL5P2-201ENST00000429598 854 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 RPL12P17-201ENST00000432393 498 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 MYO5BP2-201ENST00000449815 1277 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AL606490.1-201ENST00000452266 765 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AC090602.1-201ENST00000469695 252 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 RPS21P4-201ENST00000487122 248 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 HMGB1P44-201ENST00000508597 572 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 AC122688.1-201ENST00000541494 223 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 BLZF2P-201ENST00000553776 1130 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC4P09017 AC060766.1-201ENST00000590824 627 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 AL512329.2-201ENST00000607350 548 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 AC235565.1-201ENST00000456962 1325 ntBASIC5.44□□□□□ -1.54
HOXC4P09017 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC4P09017 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC4P09017 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC4P09017 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXC4P09017 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 DNM1P47-203ENST00000571780 12667 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC4P09017 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.43□□□□□ -1.54
HOXC4P09017 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXC4P09017 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 RNA5SP326-201ENST00000363209 110 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 BMS1P13-201ENST00000417301 885 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC4P09017 MGAT2P2-201ENST00000427194 797 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 RPL7L1P9-201ENST00000431298 745 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms