Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 AC027544.3-201ENST00000535082 757 ntBASIC5.87□□□□□ -1.47
APOEP02649 HSPE1P2-201ENST00000554777 306 ntBASIC5.87□□□□□ -1.47
APOEP02649 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.87□□□□□ -1.47
APOEP02649 AC019322.1-201ENST00000571869 389 ntBASIC5.87□□□□□ -1.47
APOEP02649 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 GVINP1-202ENST00000531871 7271 ntBASIC5.87□□□□□ -1.47
APOEP02649 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 AC012078.1-201ENST00000405035 1646 ntBASIC5.87□□□□□ -1.47
APOEP02649 AL360270.2-201ENST00000562952 5985 ntBASIC5.87□□□□□ -1.47
APOEP02649 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
APOEP02649 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.87□□□□□ -1.47
APOEP02649 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
APOEP02649 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
APOEP02649 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 OR9K1P-202ENST00000641111 3217 ntBASIC5.86□□□□□ -1.47
APOEP02649 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
APOEP02649 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
APOEP02649 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 TCP11X1-202ENST00000622971 1372 ntBASIC5.86□□□□□ -1.47
APOEP02649 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
APOEP02649 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 RNU1-136P-201ENST00000384181 164 ntBASIC5.86□□□□□ -1.47
APOEP02649 GAPDHP42-201ENST00000406848 981 ntBASIC5.86□□□□□ -1.47
APOEP02649 RN7SKP293-201ENST00000411389 296 ntBASIC5.86□□□□□ -1.47
APOEP02649 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.86□□□□□ -1.47
APOEP02649 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.86□□□□□ -1.47
APOEP02649 AC138761.5-201ENST00000433967 325 ntBASIC5.86□□□□□ -1.47
APOEP02649 AC006335.2-201ENST00000437993 330 ntBASIC5.86□□□□□ -1.47
APOEP02649 AL391987.1-201ENST00000441025 200 ntBASIC5.86□□□□□ -1.47
APOEP02649 RPS23P9-201ENST00000448848 438 ntBASIC5.86□□□□□ -1.47
APOEP02649 RPS27AP2-201ENST00000457576 465 ntBASIC5.86□□□□□ -1.47
APOEP02649 RN7SL72P-201ENST00000460697 269 ntBASIC5.86□□□□□ -1.47
APOEP02649 RN7SL174P-201ENST00000475578 289 ntBASIC5.86□□□□□ -1.47
APOEP02649 RN7SL717P-201ENST00000478343 297 ntBASIC5.86□□□□□ -1.47
APOEP02649 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.86□□□□□ -1.47
APOEP02649 DUTP7-201ENST00000507982 486 ntBASIC5.86□□□□□ -1.47
APOEP02649 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.86□□□□□ -1.47
APOEP02649 GAPDHP62-201ENST00000515313 990 ntBASIC5.86□□□□□ -1.47
APOEP02649 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.86□□□□□ -1.47
APOEP02649 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.86□□□□□ -1.47
APOEP02649 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.86□□□□□ -1.47
APOEP02649 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.86□□□□□ -1.47
APOEP02649 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.86□□□□□ -1.47
APOEP02649 MIR4311-201ENST00000580794 100 ntBASIC5.86□□□□□ -1.47
APOEP02649 AL353729.2-201ENST00000605859 1249 ntBASIC5.86□□□□□ -1.47
APOEP02649 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.86□□□□□ -1.47
APOEP02649 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 AL691477.1-201ENST00000624398 162 ntBASIC5.86□□□□□ -1.47
APOEP02649 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
APOEP02649 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
APOEP02649 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.86□□□□□ -1.47
APOEP02649 PWAR1-201ENST00000624188 2414 ntBASIC5.86□□□□□ -1.47
APOEP02649 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
APOEP02649 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 AC144833.1-201ENST00000567953 4089 ntBASIC5.85□□□□□ -1.47
APOEP02649 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
APOEP02649 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.85□□□□□ -1.47
APOEP02649 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 AL596448.1-201ENST00000415024 392 ntBASIC5.85□□□□□ -1.47
APOEP02649 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 AL354766.1-201ENST00000423396 542 ntBASIC5.85□□□□□ -1.47
APOEP02649 FMO7P-201ENST00000436045 768 ntBASIC5.85□□□□□ -1.47
APOEP02649 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
APOEP02649 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.85□□□□□ -1.47
APOEP02649 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 AC021146.10-201ENST00000515628 706 ntBASIC5.85□□□□□ -1.47
APOEP02649 NRBF2P4-201ENST00000520874 850 ntBASIC5.85□□□□□ -1.47
APOEP02649 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.85□□□□□ -1.47
APOEP02649 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.85□□□□□ -1.47
APOEP02649 PMS2P3-207ENST00000529061 717 ntBASIC5.85□□□□□ -1.47
APOEP02649 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
APOEP02649 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.85□□□□□ -1.47
APOEP02649 AC011445.2-201ENST00000599274 173 ntBASIC5.85□□□□□ -1.47
APOEP02649 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.85□□□□□ -1.47
APOEP02649 FO393422.1-201ENST00000603908 708 ntBASIC5.85□□□□□ -1.47
APOEP02649 PPATP2-201ENST00000605635 508 ntBASIC5.85□□□□□ -1.47
APOEP02649 CU639417.4-201ENST00000623928 207 ntBASIC5.85□□□□□ -1.47
APOEP02649 MIR4302-201ENST00000638058 60 ntBASIC5.85□□□□□ -1.47
APOEP02649 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
APOEP02649 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms