Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.09□□□□□ -1.59
SPTA1P02549 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.09□□□□□ -1.59
SPTA1P02549 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.09□□□□□ -1.59
SPTA1P02549 CYCSP6-201ENST00000434498 302 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 AC122718.1-201ENST00000439448 744 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.09□□□□□ -1.59
SPTA1P02549 FAM133DP-201ENST00000464802 691 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 RN7SL165P-201ENST00000477476 291 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.09□□□□□ -1.59
SPTA1P02549 HMGB1P44-201ENST00000508597 572 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.09□□□□□ -1.59
SPTA1P02549 MIR2117-201ENST00000516780 80 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SPTA1P02549 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.09□□□□□ -1.59
SPTA1P02549 MRPS21P7-201ENST00000566937 238 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 MIR5096-201ENST00000583713 70 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 AC011453.2-201ENST00000603737 729 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 AL161616.1-201ENST00000611867 286 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.09□□□□□ -1.6
SPTA1P02549 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SPTA1P02549 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.09□□□□□ -1.6
SPTA1P02549 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.09□□□□□ -1.6
SPTA1P02549 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.09□□□□□ -1.6
SPTA1P02549 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SPTA1P02549 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 AC023141.8-201ENST00000442554 208 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 RPL23AP40-201ENST00000487630 390 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 AL021368.3-201ENST00000607119 578 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 AL355974.3-201ENST00000617383 467 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 SCARNA15-201ENST00000607520 4325 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SPTA1P02549 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SPTA1P02549 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.08□□□□□ -1.6
SPTA1P02549 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.08□□□□□ -1.6
SPTA1P02549 RN7SL41P-201ENST00000476144 297 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 SNORA70.11-201ENST00000515987 138 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 SNORA70.13-201ENST00000516116 138 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SPTA1P02549 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.08□□□□□ -1.6
SPTA1P02549 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.08□□□□□ -1.6
SPTA1P02549 PCNPP1-201ENST00000552501 511 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 HSPE1P2-201ENST00000554777 306 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 RPL26P30-202ENST00000602923 645 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 AC091905.4-201ENST00000623432 202 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SPTA1P02549 AC027290.2-201ENST00000623210 18662 ntBASIC5.08□□□□□ -1.6
SPTA1P02549 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
SPTA1P02549 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPTA1P02549 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.08□□□□□ -1.6
SPTA1P02549 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPTA1P02549 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SPTA1P02549 RPL23P2-201ENST00000320371 421 ntBASIC5.07□□□□□ -1.6
SPTA1P02549 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.07□□□□□ -1.6
SPTA1P02549 AC092106.1-201ENST00000444291 373 ntBASIC5.07□□□□□ -1.6
SPTA1P02549 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.07□□□□□ -1.6
SPTA1P02549 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
SPTA1P02549 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.07□□□□□ -1.6
SPTA1P02549 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.07□□□□□ -1.6
SPTA1P02549 AL035690.1-201ENST00000490892 383 ntBASIC5.07□□□□□ -1.6
SPTA1P02549 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.07□□□□□ -1.6
SPTA1P02549 RNA5SP373-201ENST00000517271 95 ntBASIC5.07□□□□□ -1.6
SPTA1P02549 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms