Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 GAPDHP25-201ENST00000447061 1001 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 AC024940.3-201ENST00000538551 316 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.54□□□□□ -1.36
COL1A1P02452 H3F3BP2-201ENST00000583907 357 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 AP001357.1-201ENST00000586304 1053 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC100827.5-201ENST00000615883 426 ntBASIC6.54□□□□□ -1.36
COL1A1P02452 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
COL1A1P02452 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.54□□□□□ -1.36
COL1A1P02452 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 SNORA56-201ENST00000383966 129 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 SNORD56.6-201ENST00000384569 71 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL1A1P02452 RIMKLBP2-201ENST00000424737 654 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AC093655.2-201ENST00000425735 631 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 RPL7P56-201ENST00000429441 717 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 SNORD125-201ENST00000459538 96 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 RPS29P22-201ENST00000472363 168 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC109464.1-201ENST00000511091 819 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.53□□□□□ -1.36
COL1A1P02452 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC095055.1-201ENST00000603472 1113 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 MTCO1P1-201ENST00000624263 1081 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AC074101.1-201ENST00000637861 241 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 AC034229.2-201ENST00000566945 2508 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 EI24P4-201ENST00000423683 1078 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AL590399.2-201ENST00000427536 309 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.53□□□□□ -1.36
COL1A1P02452 AC058823.1-201ENST00000485315 474 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 SCARNA16.4-201ENST00000516956 187 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.53□□□□□ -1.36
COL1A1P02452 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.53□□□□□ -1.36
COL1A1P02452 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.53□□□□□ -1.36
COL1A1P02452 AP001267.4-201ENST00000602598 545 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL1A1P02452 MAPK10-270ENST00000641102 3538 ntBASIC6.53□□□□□ -1.36
COL1A1P02452 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.52□□□□□ -1.36
COL1A1P02452 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.36
COL1A1P02452 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
COL1A1P02452 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 AL355834.1-201ENST00000556602 3965 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL1A1P02452 RNU1-43P-201ENST00000365052 165 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 RBMY2QP-201ENST00000429799 1147 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 RPS11P7-201ENST00000442125 465 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 DNAJB5P1-201ENST00000454004 806 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.52□□□□□ -1.37
COL1A1P02452 AC090114.3-201ENST00000479267 829 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 AC083982.1-201ENST00000485679 344 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 SUMO2P19-201ENST00000518920 295 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.52□□□□□ -1.37
COL1A1P02452 AC092490.3-201ENST00000545370 572 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.52□□□□□ -1.37
COL1A1P02452 RN7SL356P-201ENST00000582228 248 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 FAM25E-202ENST00000608562 189 ntBASIC6.52□□□□□ -1.37
COL1A1P02452 AC069542.2-201ENST00000624816 216 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms