Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC021106.1-201ENST00000509020 1058 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 SNX18P25-201ENST00000510539 758 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC138938.1-201ENST00000515431 782 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RNA5SP206-201ENST00000516703 121 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 MIR3157-201ENST00000578688 85 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RN7SL230P-201ENST00000580835 303 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC005828.7-201ENST00000607331 556 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL139099.4-201ENST00000614802 114 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC012676.3-201ENST00000614983 479 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 OR55B1P-203ENST00000641518 2602 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL672167.1-204ENST00000641875 3017 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 MIR130A-201ENST00000385274 89 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 SNRPEP6-201ENST00000407465 277 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL445213.1-201ENST00000412589 747 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 VN1R20P-201ENST00000425215 966 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC130360.1-201ENST00000425489 1117 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC017019.1-201ENST00000426129 261 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC090018.1-201ENST00000434369 367 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 OR2L9P-201ENST00000444456 913 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 FTLP8-201ENST00000446770 267 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL031584.1-201ENST00000447169 754 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AP002453.1-201ENST00000492327 668 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 DUTP1-201ENST00000493631 470 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 RN7SL591P-201ENST00000496150 292 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 RPS24P16-201ENST00000497294 392 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 RN7SKP46-201ENST00000515942 234 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 RNA5SP441-201ENST00000516809 88 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC130365.2-201ENST00000525882 1201 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC234775.3-201ENST00000564612 656 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 MT1CP-201ENST00000567054 174 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC108738.1-201ENST00000603703 237 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms