Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 CASC19-281ENST00000642118 1554 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
PDGFBP01127 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFBP01127 RPL7P58-201ENST00000402913 758 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 DUTP5-201ENST00000406790 469 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFBP01127 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 NENFP1-201ENST00000419476 466 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 AL355994.1-201ENST00000424379 260 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 RPS3AP53-201ENST00000454716 778 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 ACA64.4-201ENST00000459070 127 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 RN7SL352P-201ENST00000466002 277 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 RPL5P22-201ENST00000480199 884 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 DEFB109A-201ENST00000482450 265 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 RN7SL205P-201ENST00000490174 284 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 FTH1P8-201ENST00000498161 514 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 SNRPCP2-201ENST00000504370 475 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFBP01127 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFBP01127 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFBP01127 RN7SL52P-201ENST00000584271 284 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AC012616.1-201ENST00000600294 197 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 AL021368.3-201ENST00000607119 578 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFBP01127 RN7SL722P-201ENST00000617780 284 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 RN7SL565P-201ENST00000618246 284 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFBP01127 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFBP01127 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFBP01127 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFBP01127 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFBP01127 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.77□□□□□ -1.49
PDGFBP01127 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFBP01127 CDC27P2-201ENST00000425026 1922 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AL356317.1-201ENST00000396110 1436 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
PDGFBP01127 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFBP01127 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 PANDAR-201ENST00000629595 1506 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFBP01127 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFBP01127 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 AC006335.2-201ENST00000437993 330 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 MTCO3P17-201ENST00000443775 513 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC073610.1-201ENST00000489971 396 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 OR4A42P-201ENST00000531397 938 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 BLZF2P-201ENST00000553776 1130 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC115989.2-201ENST00000578640 563 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 AC008745.1-201ENST00000604064 271 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC012254.5-201ENST00000623573 478 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC073869.10-201ENST00000642016 354 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFBP01127 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFBP01127 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFBP01127 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms