Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CYP4F27P-201ENST00000514557 494 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 MIR4311-201ENST00000580794 100 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 SNORA35B-201ENST00000607417 129 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 TCL6_3.1-201ENST00000619064 137 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AC005618.1-201ENST00000606901 3148 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AL731534.1-201ENST00000434711 269 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AL035690.1-201ENST00000490892 383 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 OR7H2P-201ENST00000513483 306 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC020937.1-201ENST00000519677 1013 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 KCTD9P4-201ENST00000526766 1166 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC020915.5-201ENST00000596836 964 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 AC004890.3-201ENST00000605566 1095 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.35□□□□□ -1.07
RAPGEF3O95398 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 BX322650.1-201ENST00000332359 2143 ntBASIC8.35□□□□□ -1.07
RAPGEF3O95398 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RAPGEF3O95398 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC022819.1-201ENST00000563495 3910 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RAPGEF3O95398 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 RNU1-24P-201ENST00000364285 165 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 ELOCP6-201ENST00000429066 328 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 MTCO3P43-201ENST00000440974 771 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AL356981.1-201ENST00000454879 684 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 ELOCP12-201ENST00000458706 328 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC068587.1-201ENST00000483613 781 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 OR5AN2P-201ENST00000534535 896 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC009268.1-201ENST00000561352 1203 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 ATP5J2P6-201ENST00000565203 266 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC245389.2-201ENST00000616023 576 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 AC242843.1-201ENST00000618702 573 ntBASIC8.34□□□□□ -1.07
RAPGEF3O95398 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RAPGEF3O95398 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 446.2 ms