Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 OOSP1-201ENST00000398992 1270 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC188H7C350 RPS6P23-201ENST00000413224 722 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 MRPL53P1-201ENST00000414323 319 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC188H7C350 XKRYP6-201ENST00000440468 1116 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC188H7C350 XKRYP3-201ENST00000442113 1116 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AL356121.1-201ENST00000442911 156 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC009120.1-201ENST00000493458 473 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC188H7C350 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC188H7C350 CDC42P3-201ENST00000518493 633 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AP003396.4-201ENST00000527574 265 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 HMGN2P36-201ENST00000529541 409 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC188H7C350 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 MTCYBP13-201ENST00000578634 1093 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC125494.2-201ENST00000602431 657 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AL583832.1-201ENST00000603227 784 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 MIR6793-201ENST00000612376 63 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 MIR6823-201ENST00000622118 61 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 MT-RNR2-201ENST00000387347 1559 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 AL354854.1-201ENST00000455940 1363 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 TCP11X1-202ENST00000622971 1372 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 AL360270.2-201ENST00000562952 5985 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC188H7C350 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 RNFT1P3-201ENST00000340898 1052 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC188H7C350 RNA5SP500-201ENST00000364486 119 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 AL354890.1-201ENST00000413730 346 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 BX284632.2-201ENST00000421091 399 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC007161.1-204ENST00000423039 460 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC017019.1-201ENST00000426129 261 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC188H7C350 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 VN1R110P-201ENST00000438988 971 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC064862.5-201ENST00000440618 334 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AL512605.1-202ENST00000441919 381 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 TCEA1P3-201ENST00000443005 880 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AL359955.2-201ENST00000445380 353 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC098847.1-201ENST00000473094 348 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC093225.1-201ENST00000506867 1408 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC188H7C350 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC188H7C350 SCARNA6.1-201ENST00000516989 238 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC092709.1-201ENST00000521355 1045 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC188H7C350 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC188H7C350 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 PCNAP4-201ENST00000532690 730 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC005000.1-201ENST00000536192 288 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC078878.1-201ENST00000539832 958 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 HSPE1P2-201ENST00000554777 306 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC040958.1-201ENST00000561102 201 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC020915.5-201ENST00000596836 964 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC108738.1-201ENST00000603703 237 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AF287957.1-201ENST00000607368 1595 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC108673.3-201ENST00000609183 335 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC020658.4-201ENST00000613987 684 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 HTR1DP1-201ENST00000616500 888 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 OR8G7P-201ENST00000616658 848 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 AC138965.3-201ENST00000623875 498 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.78□□□□□ -1.48
CCDC188H7C350 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC188H7C350 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC188H7C350 AC144833.1-201ENST00000567953 4089 ntBASIC5.78□□□□□ -1.48
CCDC188H7C350 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms