Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AP000859.1-201ENST00000525536 307 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 BTG1P1-201ENST00000540396 508 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AL365181.4-201ENST00000609800 547 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC022106.2-201ENST00000620114 757 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 MIR6811-201ENST00000620409 58 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC211486.4-201ENST00000621495 113 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC015871.5-202ENST00000623252 701 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC073869.10-201ENST00000642016 354 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 PSG10P-201ENST00000501199 1500 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 MTND5P23-201ENST00000430812 1655 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AL513548.1-201ENST00000562904 1724 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RNA5SP485-201ENST00000365053 119 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 OSTCP4-201ENST00000424397 449 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC113412.1-201ENST00000425840 504 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 DEFA9P-201ENST00000433042 285 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ARAFP2-201ENST00000440565 559 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 OR2L9P-201ENST00000444456 913 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC092601.1-201ENST00000444526 383 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CTSLP6-201ENST00000458273 1002 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AL591473.1-201ENST00000464297 313 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RN7SL83P-201ENST00000468131 297 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RPL5P22-201ENST00000480199 884 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 NPM1P29-201ENST00000483112 803 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 NIFKP7-201ENST00000503365 834 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC114324.2-202ENST00000503812 134 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CYCSP25-201ENST00000525280 316 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 TRIM51DP-201ENST00000529746 596 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC084121.1-201ENST00000533882 835 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC037479.1-201ENST00000558361 625 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ARGFXP2-201ENST00000579304 949 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 HTR1DP1-201ENST00000616500 888 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC037198.3-201ENST00000616754 526 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AP000648.2-201ENST00000624182 404 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC217777.1-201ENST00000570034 1471 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC018717.1-201ENST00000457712 1505 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 GNL2P1-201ENST00000451274 2190 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 AC003973.3-201ENST00000624863 2822 ntBASIC4.36□□□□□ -1.71
RBFOX3A6NFN3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RBFOX3A6NFN3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.35□□□□□ -1.71
RBFOX3A6NFN3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RBFOX3A6NFN3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RBFOX3A6NFN3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms