Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 EEF1B2P5-201ENST00000444820 548 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 GAPDHP25-201ENST00000447061 1001 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 snoU13.29-201ENST00000459370 104 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC005532.2-201ENST00000467154 373 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC021106.1-201ENST00000509020 1058 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 OR10G5P-201ENST00000532733 358 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC106730.2-201ENST00000566641 540 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 OR7A8P-201ENST00000595427 913 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AP000769.2-201ENST00000602344 396 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC015712.7-201ENST00000615211 635 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC018445.2-201ENST00000622987 260 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC074101.1-201ENST00000637861 241 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC006206.1-201ENST00000544842 3387 ntBASIC5.84□□□□□ -1.48
SMIM28A0A1B0GU29 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.84□□□□□ -1.48
SMIM28A0A1B0GU29 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC073342.2-201ENST00000595842 1800 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 OR55B1P-203ENST00000641518 2602 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RNU6-673P-201ENST00000365084 104 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RNU1-149P-201ENST00000390870 161 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RN7SKP273-201ENST00000411392 314 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC108075.1-201ENST00000424692 529 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AL451063.1-201ENST00000450164 1133 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RN7SL222P-201ENST00000476452 299 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RPL7P6-201ENST00000480903 738 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC005341.1-201ENST00000571086 708 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 SAMMSON-227ENST00000642114 1199 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AC232271.1-201ENST00000602455 2715 ntBASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMIM28A0A1B0GU29 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC138907.8-201ENST00000623981 2256 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC011493.1-201ENST00000596753 1632 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 RNA5SP487-201ENST00000410186 122 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC093655.2-201ENST00000425735 631 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 RPL34P27-201ENST00000428810 349 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC073072.2-201ENST00000447425 348 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 FAR2P1-206ENST00000449736 709 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC004815.1-201ENST00000484185 331 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 RNA5SP373-201ENST00000517271 95 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 HAUS8P1-201ENST00000549005 542 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 OR11H3P-201ENST00000554547 982 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC009962.1-201ENST00000567327 3813 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC069307.1-201ENST00000602820 447 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC126915.2-201ENST00000610957 190 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms