Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 RNU4-23P-201ENST00000362839 140 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 RNU1-19P-201ENST00000363306 165 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 RNA5SP335-201ENST00000363817 110 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC083799.1-201ENST00000366451 910 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 BTBD7P2-201ENST00000441962 620 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC092106.1-201ENST00000444291 373 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 RPS26P41-201ENST00000450370 284 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 RPEP1-201ENST00000504507 658 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 MTND2P31-201ENST00000512602 616 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC126177.5-201ENST00000549599 178 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL049779.2-201ENST00000553847 315 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 HIRAP1-201ENST00000605318 787 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC092944.2-201ENST00000605443 889 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL133481.2-203ENST00000607558 139 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AL118508.4-201ENST00000624142 1176 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 SAMMSON-227ENST00000642114 1199 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YIPF1Q9Y548 AC137056.2-201ENST00000624055 1958 ntBASIC5.86□□□□□ -1.47
YIPF1Q9Y548 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 OR4G1P-202ENST00000641173 1788 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 SNORA58B-201ENST00000364259 136 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 RN7SKP6-201ENST00000364795 319 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AL390774.1-201ENST00000411924 246 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 NANOGP4-201ENST00000427230 913 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 USP24P1-201ENST00000433802 779 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 NDUFA5P8-201ENST00000449019 346 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 RN7SL172P-201ENST00000460535 303 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC008410.1-201ENST00000483777 339 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AGGF1P3-201ENST00000493675 1213 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC008953.1-201ENST00000497334 318 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 CDC42P3-201ENST00000518493 633 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC067805.1-201ENST00000559344 470 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC044860.2-201ENST00000561005 179 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 DHFRP1-201ENST00000579682 559 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC119501.1-201ENST00000603646 475 ntBASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
YIPF1Q9Y548 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms