Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 HMGA1P8-201ENST00000414130 321 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RPS17P17-201ENST00000419392 409 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RPL34P3-201ENST00000421454 338 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AL121776.1-201ENST00000429337 372 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC064862.4-201ENST00000442180 334 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RPL23AP60-201ENST00000450011 454 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC108751.3-201ENST00000461814 1020 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 TRBV8-1-201ENST00000481590 279 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC093510.2-201ENST00000562820 896 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC104072.1-201ENST00000568817 668 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 ABI1P1-201ENST00000603375 1120 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AL137067.2-201ENST00000621202 131 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 NEPNP-201ENST00000404786 1371 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 MIR375-201ENST00000362103 64 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 NPM1P37-201ENST00000403105 874 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL096711.1-201ENST00000404780 554 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 PTGES3P2-201ENST00000407942 482 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 TMA16P2-201ENST00000413187 601 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 RPL35AP3-201ENST00000414680 288 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC013268.2-201ENST00000420753 337 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 BX119321.1-201ENST00000428912 797 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC124945.1-201ENST00000485133 188 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR9N1P-201ENST00000491296 333 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC112184.1-201ENST00000505179 312 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC093763.2-201ENST00000505334 1223 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC010460.2-201ENST00000509054 677 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 GAPDHP71-201ENST00000511530 1003 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 SNORA70.20-201ENST00000516848 126 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 RN7SKP5-201ENST00000517045 272 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CYCSP22-201ENST00000517555 339 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR6M2P-201ENST00000529831 871 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC027176.2-201ENST00000559166 746 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC023158.1-201ENST00000561632 1025 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC007225.2-201ENST00000562529 256 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC027229.1-201ENST00000583887 253 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR1AB1P-201ENST00000585564 761 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AC005776.1-201ENST00000603164 290 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 FAM72A-208ENST00000607379 1139 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 OR7M1P-201ENST00000608946 533 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL445649.1-201ENST00000615941 691 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL138955.1-201ENST00000622881 1040 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 AL049767.1-202ENST00000637826 242 ntBASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX2IPQ9Y2D8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms