Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGB4Q9UN71 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 MTND4P21-201ENST00000453886 1357 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC093775.1-201ENST00000624154 1868 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 MIR191-201ENST00000384873 92 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL132875.1-201ENST00000403623 949 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL158827.1-201ENST00000416300 391 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 NMD3P2-201ENST00000421815 761 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC006065.1-201ENST00000422539 802 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 OR6K4P-201ENST00000423179 955 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 TRIM60P16-201ENST00000444048 694 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL512593.1-201ENST00000444758 779 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ZNF619P1-201ENST00000446539 752 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 RARRES2P3-201ENST00000457739 473 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC089999.1-201ENST00000460336 374 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 H3F3AP5-201ENST00000475267 429 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC037198.2-201ENST00000478845 733 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC126615.2-201ENST00000553003 515 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC092681.3-201ENST00000609463 678 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 RFPL4AP6-201ENST00000616792 846 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AL356274.1-201ENST00000617064 410 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC096708.4-201ENST00000620563 552 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC006840.1-201ENST00000623069 542 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC021106.3-201ENST00000623925 531 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 HPVC1-201ENST00000629899 1198 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 AC099654.15-201ENST00000639802 509 ntBASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGB4Q9UN71 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AL031595.2-201ENST00000624215 19071 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AP001029.2-203ENST00000589795 4910 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RNU1-134P-201ENST00000362935 165 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AL136131.1-201ENST00000406079 803 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC245096.1-201ENST00000413104 546 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RANP4-201ENST00000413361 655 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC130360.1-201ENST00000425489 1117 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC007383.1-201ENST00000445875 636 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AL590004.3-202ENST00000445883 451 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC002553.3-201ENST00000453002 341 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RNU1-88P-201ENST00000459274 128 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AL603882.1-201ENST00000463059 681 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RPSAP37-201ENST00000470913 821 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 PFN1P6-201ENST00000476786 399 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RPS27P20-201ENST00000492051 246 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 SNORA70.11-201ENST00000515987 138 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 SNORA70.13-201ENST00000516116 138 ntBASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGB4Q9UN71 AC130365.2-201ENST00000525882 1201 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms