Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AMYP1-201ENST00000440059 1023 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC016772.1-201ENST00000444170 1261 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 OR52E3P-201ENST00000452083 936 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC087672.1-201ENST00000479876 766 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 RN7SL612P-201ENST00000497704 295 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC138832.1-201ENST00000522871 556 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 MRPS16P1-201ENST00000523462 412 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 MIR3154-201ENST00000577829 84 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC005005.4-201ENST00000623789 16698 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 ADAM5-202ENST00000399789 1942 ntBASIC5.19□□□□□ -1.58
VAPAQ9P0L0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VAPAQ9P0L0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 OR9K1P-202ENST00000641111 3217 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC017019.1-201ENST00000426129 261 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC127526.2-201ENST00000426436 775 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC007679.3-201ENST00000434035 414 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AL136455.1-201ENST00000441083 1240 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC093166.3-201ENST00000448785 303 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC104339.1-201ENST00000465478 348 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC025458.1-201ENST00000506046 166 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 IMPA1P1-201ENST00000510718 842 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC114781.3-201ENST00000512083 142 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 CDC42P3-201ENST00000518493 633 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 OR8G3P-201ENST00000533406 921 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC138207.8-204ENST00000579588 527 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC010503.3-201ENST00000594355 540 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 RN7SL544P-201ENST00000617232 284 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 RN7SL763P-201ENST00000620922 284 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 OR8G3P-202ENST00000641572 1255 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC116158.1-201ENST00000560231 2129 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
VAPAQ9P0L0 AC090181.3-201ENST00000624777 1514 ntBASIC5.18□□□□□ -1.58
VAPAQ9P0L0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VAPAQ9P0L0 RNA5SP131-201ENST00000365452 119 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms