Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 RNU6-697P-201ENST00000363348 107 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL391361.1-201ENST00000405580 489 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 ARF4P4-201ENST00000439608 520 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 RPL36AP39-201ENST00000445859 318 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 USP9YP10-201ENST00000454868 628 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 RN7SL326P-201ENST00000477493 296 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC010374.1-201ENST00000503762 1237 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 USP9YP5-201ENST00000511770 630 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 NBR2-204ENST00000587322 63 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AP001823.1-201ENST00000604056 1003 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC015849.2-201ENST00000605738 409 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 RN7SL787P-201ENST00000613000 284 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL392048.1-201ENST00000613946 534 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 FRG1DP-201ENST00000635586 771 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 RNFT1P3-201ENST00000340898 1052 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 SNORD116-4-201ENST00000384733 96 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 RN7SKP121-201ENST00000410842 305 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 TRIM60P17-201ENST00000415181 719 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 SEPT2P1-201ENST00000419651 180 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDLIM7Q9NR12 OR5M12P-201ENST00000423388 929 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 ARL5AP3-201ENST00000439327 386 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 AP000281.1-201ENST00000444036 316 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 MORF4-201ENST00000447135 971 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 HIGD1AP16-201ENST00000450986 258 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 SNX18P26-201ENST00000458433 740 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 CYCSP20-201ENST00000473154 315 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC008410.1-201ENST00000483777 339 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 RN7SL714P-201ENST00000487050 298 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 HPRT1P1-201ENST00000509498 657 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7□□□□□ -1.29
PDLIM7Q9NR12 RNA5SP362-201ENST00000516048 118 ntBASIC7□□□□□ -1.29
PDLIM7Q9NR12 TMEM97P2-201ENST00000517841 403 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms