Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC069154.1-201ENST00000432914 542 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 RPS12P17-201ENST00000438591 377 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC073465.2-201ENST00000440938 498 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC023141.8-201ENST00000442554 208 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 BMS1P10-201ENST00000443754 1120 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC068491.1-201ENST00000449539 1241 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 RPS4XP12-201ENST00000461747 709 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP000797.2-201ENST00000475768 606 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC099521.1-201ENST00000482557 334 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC023424.1-201ENST00000496058 459 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 RBBP4P1-201ENST00000502424 1276 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC079064.1-201ENST00000528365 362 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC122688.1-201ENST00000541494 223 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC006512.2-201ENST00000543250 486 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC139697.1-201ENST00000548429 745 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC007956.1-201ENST00000555623 542 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 GARSP1-201ENST00000570895 719 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AP005119.1-201ENST00000580956 292 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC005244.1-201ENST00000582566 339 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AL139099.4-201ENST00000614802 114 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC073593.1-201ENST00000624500 411 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 SAMMSON-227ENST00000642114 1199 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNB1IP1Q9NPC3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 LYARP1-201ENST00000436977 1501 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC016739.1-201ENST00000405359 345 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC019205.1-201ENST00000421830 730 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC007679.3-201ENST00000434035 414 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 Vault.2-201ENST00000516519 98 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC145423.1-201ENST00000605712 336 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC091932.2-201ENST00000623014 291 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AC015660.5-201ENST00000623238 564 ntBASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCNB1IP1Q9NPC3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms