Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AK4P4-201ENST00000419465 646 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 REREP1Y-201ENST00000422655 198 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 NPM1P48-201ENST00000436002 853 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 REREP2Y-201ENST00000439103 200 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AL500527.1-201ENST00000448532 255 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AP006222.1-205ENST00000450734 457 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC011476.1-201ENST00000466725 307 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 ATP5LP5-201ENST00000483050 299 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC105420.1-201ENST00000504389 582 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC116158.1-201ENST00000560231 2129 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 MIR4260-201ENST00000583107 67 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC092474.3-201ENST00000603022 568 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 NEPNP-201ENST00000404786 1371 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 SNORA70.6-201ENST00000383934 134 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC245060.4-201ENST00000413293 1121 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 OR5W1P-201ENST00000423705 938 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC106901.1-201ENST00000425086 698 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 KCTD9P1-201ENST00000430462 1167 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC114878.1-201ENST00000441166 358 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 RPS10P18-201ENST00000442662 495 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AL161722.1-201ENST00000446972 1032 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 RN7SL570P-201ENST00000484405 292 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 SUMO2P4-201ENST00000504193 276 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AP000619.2-201ENST00000546014 969 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AGGF1P7-201ENST00000562369 913 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC021766.1-201ENST00000624404 741 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 AC109446.4-201ENST00000623235 2755 ntBASIC5.84□□□□□ -1.47
PCDH9Q9HC56 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH9Q9HC56 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH9Q9HC56 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDH9Q9HC56 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDH9Q9HC56 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
PCDH9Q9HC56 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AC016745.2-201ENST00000608834 3443 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 OR52B3P-201ENST00000314715 928 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 MIR133A2-201ENST00000347538 102 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 OR7E101P-201ENST00000400428 513 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 MIR1282-201ENST00000408865 101 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 SLC20A1P1-201ENST00000413906 956 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AC002069.1-201ENST00000429649 1159 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AC013410.1-201ENST00000436223 1232 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 MTCYBP14-201ENST00000457471 715 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 HMGN1P8-201ENST00000463578 288 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AC073610.1-201ENST00000489971 396 ntBASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH9Q9HC56 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms