Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SMG1P4-204ENST00000523028 4131 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 RNA5SP77-201ENST00000365394 120 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC092634.1-201ENST00000366505 199 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 MIR27A-201ENST00000385073 78 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 RN7SKP108-201ENST00000411367 328 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 NENFP1-201ENST00000419476 466 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC124944.2-201ENST00000429866 1242 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 RN7SL655P-201ENST00000486087 298 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC113367.2-201ENST00000505749 160 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AP001960.1-201ENST00000506494 658 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 MIR4701-201ENST00000583094 63 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 MIR4260-201ENST00000583107 67 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC010615.3-201ENST00000597319 394 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC068768.2-201ENST00000602352 343 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 RPSAP75-201ENST00000605848 301 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC037198.3-201ENST00000616754 526 ntBASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
VIPAS39Q9H9C1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 RNA5SP30-201ENST00000365552 115 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC013442.1-201ENST00000397347 228 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 RPL35AP21-201ENST00000437667 333 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 BMS1P11-201ENST00000442351 885 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC009244.1-201ENST00000450566 258 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AL354872.1-201ENST00000456361 967 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 BMS1P9-201ENST00000457640 885 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 BTG4P1-201ENST00000510421 183 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AP004607.5-201ENST00000532034 217 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC089984.3-201ENST00000552838 363 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 HSPE1P2-201ENST00000554777 306 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC139792.1-201ENST00000607051 647 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AP003400.2-201ENST00000624036 666 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AC099654.6-201ENST00000636487 512 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 AL360270.2-201ENST00000562952 5985 ntBASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VIPAS39Q9H9C1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms