Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
EBF3Q9H4W6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL627171.1-201ENST00000618845 1308 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 RNU6-316P-201ENST00000391027 107 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 RN7SKP166-201ENST00000410812 305 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 BMS1P17-202ENST00000416720 316 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL117351.1-201ENST00000438864 766 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 MYO5BP2-201ENST00000449815 1277 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 ACA64.4-201ENST00000459070 127 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AL133372.1-201ENST00000493565 745 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC093534.1-201ENST00000504977 132 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC026688.1-201ENST00000520639 1168 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC008429.4-201ENST00000521201 182 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 HMGB1P42-201ENST00000532126 553 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC027026.1-201ENST00000532323 742 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 NPM1P42-201ENST00000560329 862 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 SDR42E1P1-201ENST00000611327 477 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC114876.1-201ENST00000490962 1366 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 AC137056.2-201ENST00000624055 1958 ntBASIC6.04□□□□□ -1.44
EBF3Q9H4W6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
EBF3Q9H4W6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 RNA5SP211-201ENST00000365516 117 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 NPM1P37-201ENST00000403105 874 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 OR6E1P-201ENST00000414424 923 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 DEFA9P-201ENST00000433042 285 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 RPS12P17-201ENST00000438591 377 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 RN7SL72P-201ENST00000460697 269 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC108751.3-201ENST00000461814 1020 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 SIAH1P1-201ENST00000479411 923 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 OR7E157P-201ENST00000494376 911 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC097486.1-201ENST00000515331 210 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 RNU6-615P-201ENST00000516065 106 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 SCARNA6.1-201ENST00000516989 238 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AL035661.1-201ENST00000620459 1144 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 AC016745.2-201ENST00000608834 3443 ntBASIC6.03□□□□□ -1.44
EBF3Q9H4W6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
EBF3Q9H4W6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms