Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL359265.1-201ENST00000440296 795 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC064862.4-201ENST00000442180 334 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 LDHBP2-201ENST00000456969 1005 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 SNRPCP3-201ENST00000474888 476 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC138866.2-201ENST00000508650 584 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AP000619.2-201ENST00000546014 969 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC020978.7-201ENST00000575953 1187 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AC126175.1-201ENST00000617041 758 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 CU639417.4-201ENST00000623928 207 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AL592429.1-201ENST00000403909 1473 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CCSER1Q9C0I3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 TMSB4XP4-201ENST00000323496 618 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP69-201ENST00000365390 305 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP81-201ENST00000365603 331 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP293-201ENST00000411389 296 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC117434.1-201ENST00000419971 836 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RN7SL101P-201ENST00000496350 279 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC112184.1-201ENST00000505179 312 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC097486.1-201ENST00000515331 210 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 MRPS21P7-201ENST00000566937 238 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 AL161912.3-201ENST00000605404 628 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCSER1Q9C0I3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC140134.1-201ENST00000511830 3544 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC144833.1-201ENST00000567953 4089 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP6-201ENST00000364795 319 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 NACAP7-201ENST00000407371 609 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RNA5SP178-201ENST00000410380 128 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RN7SKP206-201ENST00000410823 293 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 CHEK2P5-201ENST00000423877 246 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC009784.1-201ENST00000426484 460 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 RPS27AP6-201ENST00000427962 448 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC002504.1-201ENST00000438281 691 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AP000281.1-201ENST00000444036 316 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC092106.1-201ENST00000444291 373 ntBASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCSER1Q9C0I3 AC009963.4-201ENST00000448535 339 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms