Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC245060.4-201ENST00000413293 1121 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 RN7SL197P-201ENST00000466981 299 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 CR383656.1-201ENST00000484916 377 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 NENFP3-201ENST00000503735 313 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 AC022404.1-201ENST00000555320 273 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC006335.2-201ENST00000437993 330 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC064862.4-201ENST00000442180 334 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC022215.1-201ENST00000481770 362 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC097486.1-201ENST00000515331 210 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 MRPS16P1-201ENST00000523462 412 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 OR5D2P-201ENST00000524390 911 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 OR5AM1P-201ENST00000532136 1032 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 NPM1P5-201ENST00000557228 838 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AL049840.6-201ENST00000604583 345 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 RNA5SP440-201ENST00000612665 119 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AC007786.3-201ENST00000615154 596 ntBASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
UPF3BQ9BZI7 SRRM1P3-201ENST00000426911 2678 ntBASIC6.65□□□□□ -1.35
UPF3BQ9BZI7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 MTHFD2P5-201ENST00000320415 844 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR9K1P-201ENST00000326513 941 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 RNU1-19P-201ENST00000363306 165 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR7E101P-201ENST00000400428 513 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC136624.1-201ENST00000400791 413 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AL355433.1-201ENST00000422804 300 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 NIPA2P1-201ENST00000426223 976 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 NANOGP4-201ENST00000427230 913 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 NDUFB4P8-201ENST00000435351 367 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AL596266.1-201ENST00000448132 400 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AP006222.1-205ENST00000450734 457 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 EIF3LP3-201ENST00000495197 822 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 OR4A17P-201ENST00000526032 904 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 PMS2P3-207ENST00000529061 717 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 HMGB1P42-201ENST00000532126 553 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AL390726.5-202ENST00000564800 256 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 MIR4311-201ENST00000580794 100 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC009237.13-201ENST00000603193 276 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 RN7SL544P-201ENST00000617232 284 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AF117829.2-201ENST00000619538 361 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 RN7SL763P-201ENST00000620922 284 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AP000550.3-201ENST00000637734 379 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 CR383656.5-201ENST00000547616 1340 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 Z83820.1-201ENST00000456978 1499 ntBASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF3BQ9BZI7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms