Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RNU5B-4P-201ENST00000363508 111 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MIR191-201ENST00000384873 92 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AL157702.1-201ENST00000398764 426 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RN7SKP199-201ENST00000410325 305 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MTCYBP15-201ENST00000433123 1127 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MTND2P2-201ENST00000434633 945 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC092447.2-201ENST00000435487 669 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MTCYBP12-201ENST00000440559 1134 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RPL23AP60-201ENST00000450011 454 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 KF459542.1-201ENST00000450908 553 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC020898.1-201ENST00000474167 787 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 HMGB1P38-201ENST00000490557 577 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 NACAP5-201ENST00000509863 636 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC095052.1-201ENST00000509955 863 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RNA5SP206-201ENST00000516703 121 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MTCYBP19-201ENST00000517463 1124 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 IGKV2-19-201ENST00000518132 283 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 NPIPB14P-203ENST00000532298 987 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 NPM1P35-201ENST00000533043 868 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC008126.1-201ENST00000549019 480 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC106734.1-201ENST00000568646 663 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MIR4433B-201ENST00000581329 102 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC020916.2-201ENST00000591242 360 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AL445435.1-201ENST00000604232 665 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AP002802.2-201ENST00000605877 235 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RPL23AP61-201ENST00000623642 466 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 OR7A1P-202ENST00000641542 1158 ntBASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM54Q9BYV2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RNU6-207P-201ENST00000384137 107 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 RNU6-298P-201ENST00000390888 96 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AL096800.1-201ENST00000405326 893 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AL445183.3-201ENST00000414168 502 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 VN1R20P-201ENST00000425215 966 ntBASIC6.03□□□□□ -1.44
TRIM54Q9BYV2 DEFB130D-201ENST00000426866 237 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms