Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 SUMO2P13-201ENST00000403109 272 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 RPL18AP14-201ENST00000417685 526 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 HMGN1P32-201ENST00000441744 256 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC004865.1-201ENST00000442276 1003 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 COX6CP18-201ENST00000448769 222 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 NMNAT1P3-201ENST00000457517 888 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 RNU6-1218P-201ENST00000458990 108 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC066616.1-201ENST00000486795 413 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 RN7SL350P-201ENST00000492591 299 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC055733.3-201ENST00000505214 523 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC008885.2-201ENST00000509506 930 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC089984.3-201ENST00000552838 363 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC135628.1-201ENST00000568867 534 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC005479.3-201ENST00000602790 431 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 WBP1LP12-201ENST00000604449 331 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AL080312.2-201ENST00000613001 630 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC005332.6-201ENST00000613178 446 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 MTCO1P7-201ENST00000419523 1542 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 KARSP2-201ENST00000415696 1639 ntBASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.71□□□□□ -1.17
TRAIPQ9BWF2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RNU6-1200P-201ENST00000384162 107 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RNU2-6P-201ENST00000411404 190 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 SKP1P3-201ENST00000429280 487 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPL31P54-201ENST00000429803 370 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPS26P40-201ENST00000435209 294 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC064862.5-201ENST00000440618 334 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 GTF3AP5-201ENST00000442645 697 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPL7P1-201ENST00000468161 747 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 MTND4LP3-201ENST00000468320 276 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPL7P9-201ENST00000468715 747 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPL30P6-201ENST00000475925 342 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC005912.1-201ENST00000495392 255 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC114324.2-202ENST00000503812 134 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 MRPL57P6-201ENST00000506570 309 ntBASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.71□□□□□ -1.18
TRAIPQ9BWF2 RPL7L1P13-201ENST00000511702 739 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms