Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.1□□□□□ -1.75
LITAFQ99732 AC099654.15-201ENST00000639802 509 ntBASIC4.1□□□□□ -1.75
LITAFQ99732 OR7A1P-202ENST00000641542 1158 ntBASIC4.1□□□□□ -1.75
LITAFQ99732 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LITAFQ99732 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.1□□□□□ -1.75
LITAFQ99732 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.1□□□□□ -1.75
LITAFQ99732 AC092111.2-201ENST00000611627 1414 ntBASIC4.1□□□□□ -1.75
LITAFQ99732 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.1□□□□□ -1.75
LITAFQ99732 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.1□□□□□ -1.75
LITAFQ99732 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.1□□□□□ -1.75
LITAFQ99732 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
LITAFQ99732 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 AC016583.1-201ENST00000624221 2431 ntBASIC4.1□□□□□ -1.75
LITAFQ99732 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LITAFQ99732 MAPK10-338ENST00000641647 3362 ntBASIC4.1□□□□□ -1.75
LITAFQ99732 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
LITAFQ99732 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 SNORD16-201ENST00000362803 99 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 RN7SKP145-201ENST00000363291 303 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 RN7SKP189-201ENST00000365042 330 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 U3.14-201ENST00000365363 227 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 YWHAZP4-201ENST00000392459 708 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 MCTS2P-201ENST00000394552 546 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 ATP5HP3-201ENST00000396994 486 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 CHMP1B2P-201ENST00000399581 597 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AL136310.1-201ENST00000404926 654 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 RN7SKP281-201ENST00000410472 352 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 RN7SKP278-201ENST00000410504 342 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 STSP1-201ENST00000412493 1151 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 AL035458.1-201ENST00000433096 585 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 PA2G4P6-201ENST00000438325 1197 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 HSFY3P-201ENST00000444242 1191 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC023271.1-201ENST00000445936 1090 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 CCNJP1-201ENST00000450600 1149 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 FRG2FP-204ENST00000453982 852 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 NDUFB4P1-201ENST00000462398 381 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 RN7SL197P-201ENST00000466981 299 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 PRDX3P4-201ENST00000470828 747 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.09□□□□□ -1.75
LITAFQ99732 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LITAFQ99732 GLUD1P3-202ENST00000508551 200 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC008837.1-201ENST00000511513 412 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC074087.1-201ENST00000512059 724 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 NPM1P21-201ENST00000513394 762 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC010442.1-201ENST00000515583 816 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 OR9G2P-201ENST00000533326 880 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC009729.1-201ENST00000548873 1133 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC125611.1-201ENST00000549563 229 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 DUXAP6-201ENST00000553858 601 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms