Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.9□□□□□ -0.98
IFT140Q96RY7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC8.9□□□□□ -0.98
IFT140Q96RY7 AL034374.2-201ENST00000605281 548 ntBASIC8.9□□□□□ -0.98
IFT140Q96RY7 AL392048.1-201ENST00000613946 534 ntBASIC8.9□□□□□ -0.98
IFT140Q96RY7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
IFT140Q96RY7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
IFT140Q96RY7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
IFT140Q96RY7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC8.9□□□□□ -0.98
IFT140Q96RY7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
IFT140Q96RY7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
IFT140Q96RY7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
IFT140Q96RY7 AP002530.1-201ENST00000405705 684 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AL354868.1-201ENST00000417077 482 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AC069213.2-201ENST00000420238 366 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 RPL10P17-201ENST00000453852 316 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 MIR1254-2-201ENST00000579553 63 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 AC007114.2-201ENST00000576014 4281 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
IFT140Q96RY7 MIR1182-201ENST00000408363 97 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 AC006967.1-201ENST00000467608 589 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 AC233699.1-201ENST00000569955 1168 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 AP000769.2-201ENST00000602344 396 ntBASIC8.89□□□□□ -0.99
IFT140Q96RY7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.89□□□□□ -0.99
IFT140Q96RY7 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
IFT140Q96RY7 AL132640.2-201ENST00000559968 1698 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 AC140479.2-201ENST00000421567 3130 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 RPS27AP7-201ENST00000422792 455 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 AC239367.2-201ENST00000447309 705 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 RBMY2TP-201ENST00000451162 947 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 MIR4675-201ENST00000577898 77 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 RPL26P30-202ENST00000602923 645 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 AL162431.4-201ENST00000604674 411 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 AC091932.2-201ENST00000623014 291 ntBASIC8.88□□□□□ -0.99
IFT140Q96RY7 MVP-219ENST00000629059 120 ntTSL 5 BASIC8.88□□□□□ -0.99
IFT140Q96RY7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
IFT140Q96RY7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
IFT140Q96RY7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
IFT140Q96RY7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 AC116036.1-201ENST00000412199 367 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 HMGN2P25-201ENST00000486956 268 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 FTH1P8-201ENST00000498161 514 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 AC109464.1-201ENST00000511091 819 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 RN7SKP260-201ENST00000516907 149 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
IFT140Q96RY7 AC135068.12-201ENST00000637370 931 ntBASIC8.87□□□□□ -0.99
IFT140Q96RY7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.87□□□□□ -0.99
IFT140Q96RY7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 AL121886.1-201ENST00000358609 435 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 MIR23A-201ENST00000385245 73 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 RPS3AP23-201ENST00000401762 784 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 AC007559.1-201ENST00000428736 355 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 RPL7P11-201ENST00000437586 658 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 OR5AM1P-201ENST00000532136 1032 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 AC103792.1-201ENST00000603591 919 ntBASIC8.86□□□□□ -0.99
IFT140Q96RY7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.86□□□□□ -0.99
IFT140Q96RY7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
IFT140Q96RY7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms