Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 RN7SKP171-201ENST00000364417 303 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 RNU6-354P-201ENST00000383862 107 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 RNU6-610P-201ENST00000384264 107 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 SNORA5.1-201ENST00000384275 131 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 RPL12P23-201ENST00000405880 490 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 HIGD1AP15-201ENST00000416198 280 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PTP4A1P7-201ENST00000423476 514 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 FO393414.1-201ENST00000428697 1184 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 BX119321.1-201ENST00000428912 797 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC128677.1-201ENST00000436016 442 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 MTCO2P20-201ENST00000437339 673 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL591719.1-201ENST00000444669 744 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 EEF1B2P3-201ENST00000447718 678 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 EIF1P7-201ENST00000487533 337 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 MTCYBP35-201ENST00000503630 1137 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC112673.1-201ENST00000513168 575 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 IGHV4-55-201ENST00000520889 368 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL133399.1-201ENST00000527476 298 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL132857.1-201ENST00000555180 708 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 NPM1P42-201ENST00000560329 862 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC090651.1-201ENST00000567865 634 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AP000919.1-202ENST00000581139 1264 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC005034.4-201ENST00000603612 899 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC012368.3-201ENST00000604190 219 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AL450336.1-201ENST00000605180 586 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 OR7A19P-201ENST00000608051 733 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC021851.1-201ENST00000608537 1082 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC005021.1-201ENST00000608730 355 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC068726.1-201ENST00000610993 341 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC093783.1-201ENST00000612976 329 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC089999.3-201ENST00000622440 577 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC093875.1-201ENST00000623688 504 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 OR7A1P-202ENST00000641542 1158 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX18Q96RF0 CR788268.1-201ENST00000603931 1809 ntBASIC5.67□□□□□ -1.5
SNX18Q96RF0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX18Q96RF0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AOX3P-204ENST00000491025 2107 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 PARP4P2-201ENST00000446672 3326 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms