Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL21P50-201ENST00000417698 477 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL606490.7-201ENST00000433136 191 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ELOCP8-201ENST00000439309 332 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ELOCP15-201ENST00000442090 332 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC023245.1-201ENST00000468501 517 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 RN7SL705P-201ENST00000481678 294 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL133399.1-201ENST00000527476 298 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 NDUFS5P6-201ENST00000529136 295 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC103968.1-201ENST00000557841 573 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AGGF1P4-201ENST00000568249 801 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC135628.1-201ENST00000568867 534 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ZNF415P1-201ENST00000582279 1166 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AP001981.2-201ENST00000603241 418 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC024060.1-201ENST00000607052 494 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL021707.7-201ENST00000607991 416 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC091768.1-201ENST00000609258 930 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL136097.3-201ENST00000611097 505 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL512624.1-201ENST00000613638 469 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 U1.41-201ENST00000617626 165 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AL450226.2-201ENST00000622913 439 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC092159.4-201ENST00000624944 550 ntBASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
SYNGAP1Q96PV0 AC125603.4-201ENST00000621942 2699 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC079949.2-201ENST00000617117 2933 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC093278.2-201ENST00000564956 2485 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RPL11P4-201ENST00000332269 436 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-304P-201ENST00000364855 107 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC003045.1-201ENST00000398779 713 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 ELOCP17-201ENST00000414751 326 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 P2RY10P2-201ENST00000416730 913 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC079355.1-201ENST00000421770 223 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RPSAP65-201ENST00000429660 595 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC069154.1-201ENST00000432914 542 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 FGF7P5-201ENST00000441829 291 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 TVP23CP1-201ENST00000450317 639 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 Z95152.1-201ENST00000453556 656 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 NECAP1P2-201ENST00000455668 727 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RPS7P7-201ENST00000463499 571 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC004815.1-201ENST00000484185 331 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC011352.2-201ENST00000514574 1016 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-943P-201ENST00000516960 98 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RN7SKP5-201ENST00000517045 272 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RNU6-232P-201ENST00000517144 64 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC060788.1-201ENST00000521318 469 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 OR9L1P-201ENST00000529493 933 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 MIR3614-201ENST00000581261 86 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC078795.2-201ENST00000602835 1252 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 MTCO3P22-201ENST00000603219 784 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC010975.3-201ENST00000618727 978 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AP000577.1-201ENST00000624366 878 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC091965.5-201ENST00000624785 342 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 AC073488.9-201ENST00000631601 754 ntBASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SYNGAP1Q96PV0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms