Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC026367.3-201ENST00000619032 590 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 AL035661.1-201ENST00000620459 1144 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 AC074140.1-201ENST00000621617 208 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 AC091059.2-201ENST00000623355 614 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 SMG1P7-201ENST00000565246 2704 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.17□□□□□ -1.74
AP1S3Q96PC3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP1S3Q96PC3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 MFSD8-219ENST00000641228 2559 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 TTC39DP-201ENST00000416781 1688 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ARSFP1-201ENST00000398758 477 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC096921.1-201ENST00000411661 375 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 PCNPP4-201ENST00000414817 517 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 RNF10P1-201ENST00000418589 369 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 TMX2P1-201ENST00000436507 708 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 OR52I1-201ENST00000450052 1050 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 NXT1P1-201ENST00000458481 316 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC093890.1-201ENST00000502554 540 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 MYL12BP2-201ENST00000503948 512 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC138409.2-202ENST00000507274 458 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC093325.1-201ENST00000508378 326 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC074255.1-201ENST00000511259 501 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AP004607.5-201ENST00000532034 217 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC137627.1-201ENST00000545761 289 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC139697.1-201ENST00000548429 745 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC007346.1-201ENST00000569208 867 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 MIR7853-201ENST00000584820 132 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC073333.2-201ENST00000603589 769 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 U91328.4-201ENST00000608919 517 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC211486.4-201ENST00000621495 113 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC104964.3-201ENST00000606115 2860 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 ADAM5-202ENST00000399789 1942 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.16□□□□□ -1.74
AP1S3Q96PC3 OR4G1P-202ENST00000641173 1788 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 AC120338.1-201ENST00000625074 1541 ntBASIC4.16□□□□□ -1.74
AP1S3Q96PC3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 AC079097.1-201ENST00000512187 1399 ntBASIC4.15□□□□□ -1.74
AP1S3Q96PC3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.15□□□□□ -1.74
AP1S3Q96PC3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 ZNF37CP-201ENST00000406795 241 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms