Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PWAR1-201ENST00000624188 2414 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AP005435.3-201ENST00000531260 3198 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC092681.1-201ENST00000297369 291 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 OR7E101P-201ENST00000400428 513 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 NANOGP9-201ENST00000439890 892 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 RPL5P25-201ENST00000441148 775 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 RPL32P33-201ENST00000487023 394 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC073610.1-201ENST00000489971 396 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC011411.1-201ENST00000509592 876 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC074255.1-201ENST00000511259 501 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 IGLV3-24-201ENST00000517477 197 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC079064.1-201ENST00000528365 362 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 FAM27E4-201ENST00000605259 342 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AC125336.1-201ENST00000508893 2827 ntBASIC5.73□□□□□ -1.49
C9orf72Q96LT7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 RNF10P1-201ENST00000418589 369 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC126120.1-201ENST00000431082 470 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC073465.2-201ENST00000440938 498 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 HMGN1P36-201ENST00000446623 298 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 TAAR4P-201ENST00000454843 1039 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC090602.1-201ENST00000469695 252 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 NPM1P21-201ENST00000513394 762 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AL022311.1-201ENST00000623726 19416 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 OR13C1P-202ENST00000641378 2919 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 AL162456.1-201ENST00000634535 2006 ntBASIC5.72□□□□□ -1.49
C9orf72Q96LT7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
C9orf72Q96LT7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C9orf72Q96LT7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C9orf72Q96LT7 AC083899.1-201ENST00000454465 3819 ntBASIC5.71□□□□□ -1.49
C9orf72Q96LT7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.71□□□□□ -1.49
C9orf72Q96LT7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C9orf72Q96LT7 AL359715.3-201ENST00000569267 2123 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AL159987.1-201ENST00000347911 293 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 MIR375-201ENST00000362103 64 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 MIR323A-201ENST00000362199 86 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RNA5SP500-201ENST00000364486 119 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RPS6P23-201ENST00000413224 722 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 BX119321.1-201ENST00000428912 797 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AC064862.4-201ENST00000442180 334 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RPL36AP39-201ENST00000445859 318 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 ATP5LP5-201ENST00000483050 299 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 SNORA70.20-201ENST00000516848 126 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms