Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPS26P4-201ENST00000431743 355 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC007679.3-201ENST00000434035 414 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 PPIAP27-201ENST00000453800 265 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC079080.1-201ENST00000479841 822 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 RBBP4P1-201ENST00000502424 1276 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 TPT1P8-201ENST00000510120 555 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC244502.2-201ENST00000543361 851 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC012213.4-201ENST00000606457 354 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC034229.4-201ENST00000607861 441 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL445670.1-201ENST00000618889 801 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL136228.1-201ENST00000622221 319 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 LYARP1-201ENST00000436977 1501 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 PROS2P-201ENST00000474651 1951 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 SNORA72.3-201ENST00000365074 132 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 OR13C3-201ENST00000374781 1108 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 OR2W4P-201ENST00000406496 926 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC069282.1-201ENST00000411911 526 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 VN1R37P-201ENST00000419096 748 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 SFR1P2-201ENST00000421841 730 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 TUBB4BP6-201ENST00000437576 479 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 H3F3BP1-201ENST00000440551 403 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 BMS1P10-201ENST00000443754 1120 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 CFL1P4-201ENST00000451536 498 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SL168P-201ENST00000463821 279 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SL269P-201ENST00000467795 305 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 MTCO1P31-201ENST00000506355 492 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SKP34-201ENST00000516142 244 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC103833.1-201ENST00000517442 172 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 HMGB1P46-201ENST00000520062 610 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 WBP1LP3-201ENST00000523033 208 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC138701.1-201ENST00000524329 714 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC007956.1-201ENST00000555623 542 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC090236.2-201ENST00000587933 1101 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC016597.2-201ENST00000613256 341 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AL031658.2-201ENST00000616850 651 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC073593.1-201ENST00000624500 411 ntBASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP3Q96JB5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms