Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 AL359091.1-201ENST00000449048 1734 ntBASIC5.74□□□□□ -1.49
VMP1Q96GC9 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.74□□□□□ -1.49
VMP1Q96GC9 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.74□□□□□ -1.49
VMP1Q96GC9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 COX6B1P3-201ENST00000312310 260 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 RNU1-134P-201ENST00000362935 165 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AL132875.1-201ENST00000403623 949 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 RPL35AP31-201ENST00000418340 337 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AMYP1-201ENST00000440059 1023 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 RPS27AP3-201ENST00000453803 454 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC117394.1-201ENST00000477323 567 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 ST13P12-201ENST00000508958 1094 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 CYP4F27P-201ENST00000514557 494 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 CR383658.1-201ENST00000514609 734 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 RNA5SP434-201ENST00000516647 121 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 RN7SKP35-201ENST00000517210 151 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC021269.1-201ENST00000526860 705 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC134669.1-201ENST00000581275 672 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC073333.2-201ENST00000603589 769 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC116667.2-201ENST00000641075 823 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AP001541.1-201ENST00000623322 1904 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC138907.8-201ENST00000623981 2256 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AL359955.1-201ENST00000455242 3275 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VMP1Q96GC9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 AC093225.1-201ENST00000506867 1408 ntBASIC5.73□□□□□ -1.49
VMP1Q96GC9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VMP1Q96GC9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VMP1Q96GC9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VMP1Q96GC9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VMP1Q96GC9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VMP1Q96GC9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 RNA5SP110-201ENST00000362638 115 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 SNORA51.9-201ENST00000384295 124 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 MTCYBP29-201ENST00000436327 1006 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 CYCSP11-201ENST00000436426 315 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 PA2G4P6-201ENST00000438325 1197 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 SEPT14P12-201ENST00000442280 560 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC098847.1-201ENST00000473094 348 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 RBBP4P1-201ENST00000502424 1276 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 RNU6-551P-201ENST00000516661 103 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC022826.1-201ENST00000519383 805 ntBASIC5.72□□□□□ -1.49
VMP1Q96GC9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VMP1Q96GC9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.72□□□□□ -1.49
VMP1Q96GC9 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms