Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 RNA5SP441-201ENST00000516809 88 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC008147.3-201ENST00000548666 354 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 DUX4L52-201ENST00000549363 777 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AP002884.5-201ENST00000595053 1132 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 SMIM12P1-201ENST00000603004 274 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 WBP1LP12-201ENST00000604449 331 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 MIR6774-201ENST00000614651 70 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC096861.1-201ENST00000616652 240 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL512652.1-201ENST00000619006 500 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL158062.1-201ENST00000619632 745 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC092376.2-201ENST00000622621 4116 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 SNORA21-201ENST00000362423 132 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 RNU1-134P-201ENST00000362935 165 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 U3.7-201ENST00000363668 216 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 MIR188-201ENST00000385034 86 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 MT-RNR1-201ENST00000389680 954 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL133260.1-201ENST00000405720 405 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 RNA5SP431-201ENST00000410312 120 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 RN7SKP108-201ENST00000411367 328 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 TRIM60P13-201ENST00000432350 1283 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 ARL5AP3-201ENST00000439327 386 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL606490.8-201ENST00000441624 319 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 SEPT14P12-201ENST00000442280 560 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 CCRL1P1-201ENST00000449542 1053 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 PFN1P6-201ENST00000476786 399 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 STRADBP1-201ENST00000478954 1281 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AP002453.1-201ENST00000492327 668 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 UGT2A3P7-201ENST00000510485 734 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 CR383658.1-201ENST00000514609 734 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 SETP1-201ENST00000556014 845 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL356608.1-201ENST00000610034 820 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL118556.2-201ENST00000614375 824 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC074140.1-201ENST00000621617 208 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC010325.3-201ENST00000641084 394 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 AL139254.3-201ENST00000641097 674 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RFT1Q96AA3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFT1Q96AA3 AC097461.1-201ENST00000568928 2821 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 SMG1P7-201ENST00000565246 2704 ntBASIC5.1□□□□□ -1.59
RFT1Q96AA3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFT1Q96AA3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms