Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
ERCC4Q92889 RNU6-489P-201ENST00000618289 107 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AC006386.1-201ENST00000619436 415 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AC008691.1-209ENST00000642094 814 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.87□□□□□ -1.31
ERCC4Q92889 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 AL359091.1-201ENST00000449048 1734 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
ERCC4Q92889 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.86□□□□□ -1.31
ERCC4Q92889 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.86□□□□□ -1.31
ERCC4Q92889 ZNF29P-201ENST00000225587 168 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 TAS2R15P-201ENST00000390674 928 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 YWHAZP4-201ENST00000392459 708 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AL592310.1-201ENST00000414330 671 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 PTCD2P2-201ENST00000415579 1095 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 BX664727.1-201ENST00000416024 466 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 FAM183DP-201ENST00000421987 399 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 GAPDHP19-201ENST00000431768 1005 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC094019.1-201ENST00000434678 472 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 RPS3AP38-201ENST00000435889 763 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 EMC3-AS1-205ENST00000438698 534 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 MTCYBP31-201ENST00000438855 1122 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 RPL12P49-201ENST00000441100 121 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 OR2L9P-201ENST00000444456 913 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 RN7SL836P-201ENST00000476140 296 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 PPM1AP1-201ENST00000502740 1135 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC093770.1-201ENST00000511559 571 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC010476.1-201ENST00000519111 851 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 MTATP6P15-201ENST00000527233 835 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 MRPS36P5-201ENST00000551909 298 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 MIR212-201ENST00000586026 110 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC026898.1-201ENST00000586404 571 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC008555.7-201ENST00000605008 583 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC141002.1-201ENST00000607025 279 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC093388.1-201ENST00000609166 430 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 uc_338.26-201ENST00000612659 160 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC007603.3-201ENST00000636915 979 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 AC132825.7-201ENST00000638744 335 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 AC012321.1-201ENST00000561622 1588 ntBASIC6.86□□□□□ -1.31
ERCC4Q92889 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
ERCC4Q92889 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC4Q92889 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC138907.8-201ENST00000623981 2256 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC4Q92889 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC020656.2-201ENST00000613291 5309 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC4Q92889 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 SEPT7P8-201ENST00000413308 775 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AL606490.7-201ENST00000433136 191 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC044797.1-201ENST00000445744 679 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 EXOSC3P1-201ENST00000448649 500 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AL122001.1-201ENST00000457027 370 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 AC022336.1-201ENST00000475510 337 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 RPL34P33-201ENST00000486062 334 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 HMGB1P38-201ENST00000490557 577 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 ASNSP4-201ENST00000511103 447 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 HMGB1P46-201ENST00000520062 610 ntBASIC6.85□□□□□ -1.31
ERCC4Q92889 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC4Q92889 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.85□□□□□ -1.31
ERCC4Q92889 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC4Q92889 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms