Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 OR5T3-201ENST00000303059 1023 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 RNA5SP241-201ENST00000391326 114 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC005042.1-201ENST00000393397 800 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 RNF10P1-201ENST00000418589 369 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 Z85994.2-201ENST00000434327 452 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 PSAT1P4-201ENST00000466500 526 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 DUTP1-201ENST00000493631 470 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC122714.1-201ENST00000502510 459 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC093325.1-201ENST00000508378 326 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC092709.1-201ENST00000521355 1045 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC027026.1-201ENST00000532323 742 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC009268.1-201ENST00000561352 1203 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 DHFRP1-201ENST00000579682 559 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 MIR3936-201ENST00000584304 110 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 MIR7853-201ENST00000584820 132 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AL118508.4-201ENST00000624142 1176 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC073869.7-201ENST00000640874 297 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 MUC2-202ENST00000613187 4845 ntBASIC4.81□□□□□ -1.64
BEST4Q8NFU0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST4Q8NFU0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 AC004817.4-201ENST00000602396 3625 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 Y_RNA.62-201ENST00000362840 99 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 MIR431-201ENST00000385266 114 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 MIR130A-201ENST00000385274 89 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 AC016739.1-201ENST00000405359 345 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 RCC2P2-201ENST00000422174 918 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 PPIAP7-201ENST00000454070 489 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST4Q8NFU0 MYL12BP2-201ENST00000503948 512 ntBASIC4.8□□□□□ -1.64
BEST4Q8NFU0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms