Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC018714.1-201ENST00000605028 208 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC026951.2-201ENST00000613847 241 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 CR381653.2-201ENST00000624041 768 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC127502.3-201ENST00000636170 1206 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 SSXP3-201ENST00000442971 1300 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 DDX43P1-201ENST00000510713 1763 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 NCOA4P3-201ENST00000513203 1877 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AP000776.1-201ENST00000530032 1663 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 IL6STP1-201ENST00000346911 1020 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 U3.14-201ENST00000365363 227 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 RPS3AP5-201ENST00000389400 821 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 FAUP2-201ENST00000394301 401 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AL604028.2-201ENST00000437848 788 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 DNAJC19P4-201ENST00000440115 345 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MTATP6P30-201ENST00000443540 664 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 WDR82P2-201ENST00000444540 928 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CEACAMP5-201ENST00000448037 961 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 RBMY3AP-201ENST00000449381 1145 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 RPLP0P1-201ENST00000457002 361 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 WBP1LP1-201ENST00000460451 896 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC026826.1-201ENST00000493002 361 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AP003033.2-201ENST00000528901 805 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC090971.3-201ENST00000557871 1041 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC012182.1-201ENST00000570133 895 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC068276.1-201ENST00000605793 379 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC012640.3-201ENST00000607847 430 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 PTCHD3P1-201ENST00000612350 537 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AC135068.5-201ENST00000624197 983 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MIR3688-2-201ENST00000636963 87 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 MTND5P42-201ENST00000637720 498 ntBASIC6.4□□□□□ -1.38
ATG4DQ86TL0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4DQ86TL0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
ATG4DQ86TL0 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms