Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HSPA8P14-201ENST00000552265 1805 ntBASIC6.73□□□□□ -1.33
CTR9Q6PD62 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTR9Q6PD62 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CTR9Q6PD62 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTR9Q6PD62 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.73□□□□□ -1.33
CTR9Q6PD62 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 SNORA5.1-201ENST00000384275 131 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 MIR143-201ENST00000385300 106 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 GABARAPL3-201ENST00000412799 354 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AL121878.1-201ENST00000418638 859 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 GNG5P5-201ENST00000420444 220 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AL133173.1-201ENST00000423458 397 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC092651.1-201ENST00000426110 312 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 VN1R21P-201ENST00000426703 765 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC006335.2-201ENST00000437993 330 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC093719.1-201ENST00000480427 441 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC139697.1-201ENST00000548429 745 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 MRPS21P7-201ENST00000566937 238 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC090286.3-201ENST00000573133 187 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 PWAR1-201ENST00000624188 2414 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 AC011933.2-201ENST00000578539 2790 ntBASIC6.72□□□□□ -1.33
CTR9Q6PD62 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CTR9Q6PD62 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.72□□□□□ -1.33
CTR9Q6PD62 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CTR9Q6PD62 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CTR9Q6PD62 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CTR9Q6PD62 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CTR9Q6PD62 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CTR9Q6PD62 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC019185.1-201ENST00000442718 389 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 NPM1P19-201ENST00000450070 712 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 RPS7P6-201ENST00000485777 579 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 USP9YP2-201ENST00000504503 1000 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 RPL7L1P4-201ENST00000513004 707 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 USP9YP1-201ENST00000513521 1002 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 ATP5LP3-201ENST00000514223 304 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 FTH1P11-201ENST00000517577 551 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 MIR3176-201ENST00000582210 90 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 HIRAP1-201ENST00000605318 787 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 AP000894.4-201ENST00000610185 483 ntBASIC6.71□□□□□ -1.34
CTR9Q6PD62 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CTR9Q6PD62 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CTR9Q6PD62 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
CTR9Q6PD62 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTR9Q6PD62 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CTR9Q6PD62 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms