Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 U3.3-201ENST00000362986 216 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 GLULP6-201ENST00000399502 913 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CYP4F29P-201ENST00000420685 446 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 GTF2F2P1-201ENST00000511083 675 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 YWHABP2-201ENST00000540201 713 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 AC009597.2-201ENST00000604659 592 ntBASIC8.83□□□□□ -1
SNAPC4Q5SXM2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
SNAPC4Q5SXM2 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AC013268.3-201ENST00000262716 2324 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 MIR105-1-201ENST00000385222 81 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 MEMO1P4-201ENST00000453590 386 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 OSTCP1-201ENST00000455507 450 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AP000797.2-201ENST00000475768 606 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AC023818.1-201ENST00000498379 384 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 WBP11P1-201ENST00000562560 1931 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 MEMO1P5-201ENST00000604810 406 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 NANOGP3-201ENST00000605855 286 ntBASIC8.82□□□□□ -1
SNAPC4Q5SXM2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SNAPC4Q5SXM2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 NXF4-202ENST00000416098 1465 ntBASIC8.81□□□□□ -1
SNAPC4Q5SXM2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNAPC4Q5SXM2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 MAPK10-304ENST00000641341 3984 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 SNORA70H-201ENST00000383910 135 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 SNORA70J-201ENST00000384182 135 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 RNA5SP332-201ENST00000391063 115 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 CNOT7P1-201ENST00000429006 852 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 RPL5P25-201ENST00000441148 775 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 RN7SKP253-201ENST00000516424 309 ntBASIC8.8□□□□□ -1
SNAPC4Q5SXM2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNAPC4Q5SXM2 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 DBIP1-201ENST00000401435 260 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AC069213.2-201ENST00000420238 366 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 TMEM183AP1-205ENST00000432739 290 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 USP24P1-201ENST00000433802 779 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AC012512.1-201ENST00000446594 718 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 NUTF2P7-201ENST00000453086 375 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AC063943.1-201ENST00000465434 453 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AC007537.2-201ENST00000472093 511 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 TOMM20P2-201ENST00000540082 421 ntBASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SNAPC4Q5SXM2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms