Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC104108.1-201ENST00000509930 412 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.93□□□□□ -1.3
PCDH1Q08174 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.93□□□□□ -1.3
PCDH1Q08174 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 AC112220.3-201ENST00000605502 502 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 RN7SL778P-201ENST00000607160 297 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC007014.2-201ENST00000615581 479 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC068234.2-201ENST00000619646 522 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AC007342.8-201ENST00000623278 678 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 OR5H6-203ENST00000642105 978 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 GOT2P1-201ENST00000440922 1309 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 RAD17P2-201ENST00000451754 1977 ntBASIC6.93□□□□□ -1.3
PCDH1Q08174 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH1Q08174 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH1Q08174 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.93□□□□□ -1.3
PCDH1Q08174 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
PCDH1Q08174 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 SPATA31C1-201ENST00000420021 3895 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDH1Q08174 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 SNORA4.1-201ENST00000364263 144 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 RN7SKP1-201ENST00000365525 307 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 RNU6-348P-201ENST00000384386 107 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 RN7SKP62-201ENST00000384539 329 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 NHP2P2-201ENST00000396362 460 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 NPM1P4-201ENST00000414095 812 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC023141.1-201ENST00000419418 379 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDH1Q08174 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AP000542.1-201ENST00000448473 371 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 MTND5P20-201ENST00000448677 143 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC004692.1-201ENST00000455430 424 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 BX323845.2-201ENST00000458382 234 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 SNORA81.1-201ENST00000458922 177 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 PSMA2P2-201ENST00000504319 686 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 BTG4P1-201ENST00000510421 183 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AC017007.1-201ENST00000511960 415 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDH1Q08174 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDH1Q08174 DEFB108A-201ENST00000530110 222 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDH1Q08174 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDH1Q08174 EGLN3P1-201ENST00000541727 720 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDH1Q08174 AC012511.1-201ENST00000608140 449 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AC063943.3-201ENST00000615562 356 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 uc_338.37-201ENST00000620113 186 ntBASIC6.92□□□□□ -1.3
PCDH1Q08174 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH1Q08174 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH1Q08174 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms