Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
UBE3AQ05086 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 AL356317.1-201ENST00000396110 1436 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
UBE3AQ05086 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
UBE3AQ05086 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.26□□□□□ -1.41
UBE3AQ05086 MIR421-201ENST00000365696 85 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC113412.1-201ENST00000425840 504 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 NANOGP4-201ENST00000427230 913 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 MTND4LP7-201ENST00000431728 294 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 GAPDHP58-201ENST00000438477 1006 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.26□□□□□ -1.41
UBE3AQ05086 FRG2FP-204ENST00000453982 852 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC093166.4-201ENST00000457867 318 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 RN7SL72P-201ENST00000460697 269 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 RPL32P9-201ENST00000487963 407 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC231760.1-201ENST00000498002 260 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.26□□□□□ -1.41
UBE3AQ05086 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC092868.3-201ENST00000560515 784 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC044860.2-201ENST00000561005 179 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC024589.2-201ENST00000605642 1294 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 AC007204.2-201ENST00000615022 616 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC021766.1-201ENST00000624404 741 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
UBE3AQ05086 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 SAMM50P1-201ENST00000455403 1399 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 DOCK11P1-201ENST00000553480 5932 ntBASIC6.26□□□□□ -1.41
UBE3AQ05086 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.26□□□□□ -1.41
UBE3AQ05086 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UBE3AQ05086 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
UBE3AQ05086 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.26□□□□□ -1.41
UBE3AQ05086 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.25□□□□□ -1.41
UBE3AQ05086 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC011503.2-201ENST00000594230 1500 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 BX284613.1-201ENST00000452221 1641 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 AL662795.2-201ENST00000624252 3706 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 RNA5SP211-201ENST00000365516 117 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 OR13C3-201ENST00000374781 1108 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 SNORA70-201ENST00000384436 135 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 RN7SKP59-201ENST00000410520 314 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 MYL6P5-201ENST00000412707 459 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 RPS27P18-201ENST00000431701 247 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AL138787.1-202ENST00000437804 898 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AL691517.1-201ENST00000440833 1235 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.25□□□□□ -1.41
UBE3AQ05086 MTND5P8-201ENST00000449817 1083 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AL606490.1-201ENST00000452266 765 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 MTND6P32-201ENST00000457611 483 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 HMGB1P47-201ENST00000511281 589 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.25□□□□□ -1.41
UBE3AQ05086 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.25□□□□□ -1.41
UBE3AQ05086 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC015720.2-201ENST00000567709 334 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AC092474.3-201ENST00000603022 568 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 TCL6_3.1-201ENST00000619064 137 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 MIR6837-201ENST00000620884 64 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
UBE3AQ05086 CASC19-264ENST00000641912 1184 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC024341.1-201ENST00000526444 1552 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UBE3AQ05086 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.25□□□□□ -1.41
UBE3AQ05086 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
UBE3AQ05086 AC007342.5-201ENST00000571340 2142 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 AP000432.2-201ENST00000624164 2048 ntBASIC6.25□□□□□ -1.41
UBE3AQ05086 YES1P1-201ENST00000418510 1628 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms