Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC244505.3-201ENST00000454598 187 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC107015.1-201ENST00000466902 747 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 RPL7AP23-201ENST00000482625 776 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 RN7SL362P-201ENST00000494228 267 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC021106.1-201ENST00000509020 1058 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC095052.1-201ENST00000509955 863 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC119751.5-201ENST00000514077 770 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AP003080.1-202ENST00000526526 915 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 TRIM51DP-201ENST00000529746 596 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 CYP2C60P-201ENST00000566088 139 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC023824.3-201ENST00000569003 562 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC002310.3-201ENST00000569728 723 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 MIR5095-201ENST00000578844 88 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 DUXAP3-201ENST00000603616 594 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC013468.1-201ENST00000608680 598 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC004241.2-201ENST00000614562 444 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC010975.3-201ENST00000618727 978 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC007342.8-201ENST00000623278 678 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC120057.5-201ENST00000623840 154 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC120349.3-201ENST00000624377 529 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AL035425.4-201ENST00000624509 1063 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.8□□□□□ -1.48
NKX6-1P78426 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC110597.1-201ENST00000562669 3176 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINC01613-201ENST00000561476 2780 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 TMCC1P1-201ENST00000518897 1980 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AP005139.1-201ENST00000580702 1647 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX6-1P78426 RNA5SP65-201ENST00000363166 119 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 RNA5SP512-201ENST00000364550 120 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 RNU6-636P-201ENST00000384598 107 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 MIR137-201ENST00000385223 102 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NKX6-1P78426 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 TCEA1P4-201ENST00000415066 844 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC010099.3-201ENST00000423896 409 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC239367.3-201ENST00000428996 814 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC069154.1-201ENST00000432914 542 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC084290.1-201ENST00000434995 374 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 POU5F1P5-201ENST00000445059 658 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AL161722.1-201ENST00000446972 1032 ntBASIC5.79□□□□□ -1.48
NKX6-1P78426 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX6-1P78426 AC104687.1-201ENST00000485829 412 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms